Pre_GI: BLASTP Hits

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Query: NC_012668:442601:455500 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 455500, End: 457254, Length: 1755

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:2607000260700026087541755Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein01216
NC_012667:703852:7170717170717188251755Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein01216
NC_016944:168530:1817301817301834841755Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein01214
NC_002505:168532:1817321817321834861755Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein01214
NC_015730:1107840:1123055112305511246291575Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein5e-1789.7
NC_010634:4463727:4477121447712144788601740Yersinia pseudotuberculosis PB1/+, complete genomeUBA/THIF-type NAD/FAD binding protein2e-1274.3
NC_010725:5491491:5507451550745155091121662Methylobacterium populi BJ001, complete genomeUBA/THIF-type NAD/FAD binding protein4e-1170.5
NC_010512:1015557:1037129103712910389191791Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceUBA/THIF-type NAD/FAD binding protein1e-1068.9
NC_013921:1915377:1917570191757019194081839Thermoanaerobacter italicus Ab9 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein2e-0964.3
NC_010334:2131939:2143701214370121454251725Shewanella halifaxensis HAW-EB4, complete genomeUBA/THIF-type NAD/FAD binding protein3e-0963.9
NC_013922:331847:3427613427613450762316Natrialba magadii ATCC 43099 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein3e-0963.9
NC_007761:2071500:2087205208720520888931689Rhizobium etli CFN 42, complete genomehypothetical protein7e-0962.8
NC_015458:2338437:2344636234463623463451710Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein2e-0861.6
NC_016609:7427500:7452556745255674542951740Niastella koreensis GR20-10 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein4e-0757
NC_008740:3520500:3528011352801135301882178Marinobacter aquaeolei VT8, complete genomeUBA/THIF-type NAD/FAD binding protein1e-0655.5
NC_014540:2933853:2962412296241229641361725Burkholderia sp. CCGE1003 chromosome 2, complete sequenceUBA/THIF-type NAD/FAD-binding protein2e-0654.7