Pre_GI: BLASTP Hits

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Query: NC_012668:368305:403645 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 403645, End: 404388, Length: 744

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:4631866:464282346428234643551729Shewanella sp. MR-4, complete genomehypothetical protein2e-83308
NC_008577:4907497:491845749184574919185729Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein3e-83308
NC_006526:1303635:131565013156501316372723Zymomonas mobilis subsp. mobilis ZM4, complete genomecapsular polysaccharide biosynthesis protein2e-64245
NC_018145:50237:568985689857620723Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completedTDP-glucose pyrophosphorylase3e-64245
NC_011751:3530954:354134235413423542088747Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-61235
NC_011144:1264871:128836012883601289085726Phenylobacterium zucineum HLK1, complete genomecapsular polysaccharide biosynthesis protein3e-61234
NC_013209:1925341:194383519438351944566732Acetobacter pasteurianus IFO 3283-01, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017100:1929672:194482119448211945552732Acetobacter pasteurianus IFO 3283-03, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017108:1925323:194381719438171944548732Acetobacter pasteurianus IFO 3283-12, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017111:1925311:194380519438051944536732Acetobacter pasteurianus IFO 3283-32, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017121:1925323:194381719438171944548732Acetobacter pasteurianus IFO 3283-07, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017125:1929666:194481619448161945547732Acetobacter pasteurianus IFO 3283-22, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017146:1929678:194482819448281945559732Acetobacter pasteurianus IFO 3283-26, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017150:1833087:185158118515811852312732Acetobacter pasteurianus IFO 3283-01-42C, complete genomedTDP-glucose pyrophosphorylase2e-60232
NC_017033:3013654:303076230307623031490729Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein2e-59229
NC_017279:1355441:136132013613201362042723Campylobacter jejuni subsp. jejuni IA3902 chromosome, completecapsular polysaccharide biosynthesis protein9e-58223
NC_012039:257962:275380275380276111732Campylobacter lari RM2100, complete genomecapsular polysaccharide biosynthesis protein1e-55216
NC_015677:896673:915943915943916677735Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein6e-55214
NC_012918:1921891:193409119340911934831741Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-35149
NC_014973:2945942:295298029529802953723744Geobacter sp. M18 chromosome, complete genomehypothetical protein2e-35149
NC_007347:767455:792367792367793122756Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein5e-30131
NC_008347:2677000:2678359267835926798731515Maricaulis maris MCS10, complete genomeNucleotidyl transferase1e-21103
NC_005773:5310339:531752853175285318289762Pseudomonas syringae pv. phaseolicola 1448A, complete genomelipopolysaccharide biosynthesis protein, putative2e-1479.3
NC_006087:177375:1985801985802000761497Leifsonia xyli subsp. xyli str. CTCB07, complete genomedolichyl-phosphate mannose synthase1e-1273.2
NC_014387:177308:184417184417185139723Butyrivibrio proteoclasticus B316 chromosome 1, complete genomenucleotidyl transferase3e-1272.4
NC_014387:177308:183355183355184086732Butyrivibrio proteoclasticus B316 chromosome 1, complete genomenucleotidyl transferase3e-1272.4
NC_012039:257962:278736278736279473738Campylobacter lari RM2100, complete genomecapsular polysaccharide biosynthesis protein, putative nucleotidyltransferase3e-1272.4
NC_017279:1355441:1365910136591013677691860Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative sugar nucleotidyltransferase1e-1170.5
NC_013943:2857751:285702628570262857754729Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomecapsular polysaccharide biosynthesis protein nucleotidyltransferase5e-1064.7
NC_012039:257962:277352277352278092741Campylobacter lari RM2100, complete genomecapsular polysaccharide biosynthesis protein, putative nucleotidyltransferase2e-0962.8
NC_017279:1355441:136842613684261369151726Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative nucleotidyl transferase4e-0962