Pre_GI: BLASTP Hits

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Query: NC_012668:368305:386040 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 386040, End: 387431, Length: 1392

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012578:224559:2375432375432389341392Vibrio cholerae M66-2 chromosome I, complete sequencerfbG protein0947
NC_002505:238569:2515552515552529461392Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completerfbG protein0947
NC_012582:272320:2853062853062866971392Vibrio cholerae O395 chromosome chromosome I, complete sequencerfbG protein0947
NC_009457:2764972:2777958277795827793491392Vibrio cholerae O395 chromosome 2, complete sequencerfbG protein0947
NC_017270:220282:2345572345572359391383Vibrio cholerae LMA3984-4 chromosome chromosome I, completeO-antigen export system, polymerase or transferase0942
NC_016944:238580:2515752515752529571383Vibrio cholerae IEC224 chromosome I, complete sequencerfbG protein0942
NC_016445:2663837:2676832267683226782141383Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRfbG protein0942