Pre_GI: BLASTP Hits

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Query: NC_012668:368305:384239 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 384239, End: 384481, Length: 243

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2663837:267977326797732680015243Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeacyl carrier protein2e-24111
NC_012582:272320:288256288256288498243Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative acyl carrier protein2e-24111
NC_012578:224559:240493240493240735243Vibrio cholerae M66-2 chromosome I, complete sequenceputative acyl carrier protein2e-24111
NC_009457:2764972:278090827809082781150243Vibrio cholerae O395 chromosome 2, complete sequenceacyl carrier protein2e-24111
NC_002505:238569:254505254505254747243Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeacyl carrier protein, putative2e-24111
NC_017270:220282:237507237507237740234Vibrio cholerae LMA3984-4 chromosome chromosome I, completeacyl carrier protein2e-22104
NC_016944:238580:254525254525254758234Vibrio cholerae IEC224 chromosome I, complete sequenceacyl carrier protein2e-22104
NC_019968:891904:902244902244902483240Prevotella dentalis DSM 3688 chromosome 2, complete sequenceacyl carrier protein5e-0649.7