Pre_GI: BLASTP Hits

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Query: NC_012668:2744393:2801399 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 2801399, End: 2803015, Length: 1617

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:338288:3382883382883399041617Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein01050
NC_012582:882931:8829318829318845471617Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein01050
NC_012578:818241:8182418182418198571617Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein01050
NC_009457:351512:3515123515123531281617Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein01050
NC_002505:860789:8607898607898624051617Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein01050
NC_015381:3091500:3091826309182630934481623Burkholderia gladioli BSR3 chromosome 1, complete sequenceFAD dependent oxidoreductase0710
NC_008786:557314:5724015724015741971797Verminephrobacter eiseniae EF01-2, complete genomeFAD dependent oxidoreductase6e-172604
NC_010520:3753875:3769290376929037708881599Clostridium botulinum A3 str. Loch Maree, complete genomeoxidoreductase, FAD-binding1e-140499
NC_017297:3752000:3770169377016937717671599Clostridium botulinum F str. 230613 chromosome, complete genomeoxidoreductase, FAD-binding protein3e-140498
NC_009699:3753599:3771555377155537731531599Clostridium botulinum F str. Langeland chromosome, complete genomeoxidoreductase, FAD-binding3e-140498
NC_010516:3724312:3739776373977637413741599Clostridium botulinum B1 str. Okra, complete genomeoxidoreductase, FAD-binding3e-140498
NC_009697:3629250:3644712364471236463101599Clostridium botulinum A str. ATCC 19397 chromosome, completeoxidoreductase, FAD-binding1e-139496
NC_009698:3526359:3541821354182135434191599Clostridium botulinum A str. Hall chromosome, complete genomeoxidoreductase, FAD-binding1e-139496
NC_012658:3744000:3759639375963937612371599Clostridium botulinum Ba4 str. 657 chromosome, complete genomeFAD-binding oxidoreductase8e-139494
NC_012563:3921859:3936627393662739382251599Clostridium botulinum A2 str. Kyoto, complete genomeoxidoreductase, FAD-binding1e-138493
NC_020291:231853:2443252443252459411617Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeFAD-dependent dehydrogenase2e-132473
NC_014328:4387303:4399090439909044006881599Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative FAD dependent dehydrogenase2e-125450
NC_008261:2920999:2930156293015629317571602Clostridium perfringens ATCC 13124, complete genomehypothetical protein2e-121436
NC_011830:923424:9272659272659288691605Desulfitobacterium hafniense DCB-2, complete genomeFAD dependent oxidoreductase4e-111402
NC_016776:701684:7144187144187160071590Bacteroides fragilis 638R, complete genomehypothetical protein7e-86318
NC_006347:700838:7109537109537125421590Bacteroides fragilis YCH46, complete genomeNAD-utilizing dehydrogenase9e-86318
NC_003228:648669:6587846587846603731590Bacteroides fragilis NCTC 9343, complete genomehypothetical protein9e-86318
NC_019978:2293327:2310167231016723115431377Halobacteroides halobius DSM 5150, complete genomeFAD-dependent dehydrogenase7e-25115
NC_018870:81396:8247982479838761398Thermacetogenium phaeum DSM 12270 chromosome, complete genomeFAD dependent oxidoreductase1e-20101
NC_010320:2397395:2397395239739523987771383Thermoanaerobacter sp. X514 chromosome, complete genomeFAD dependent oxidoreductase2e-1997.8
NC_014538:2396559:2396559239655923979411383Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein2e-1997.8
NC_007503:2338110:2370893237089323722781386Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein2e-1791.3
NC_014205:17445:2688126881283021422Staphylothermus hellenicus DSM 12710 chromosome, complete genomeFAD dependent oxidoreductase2e-1791.3
NC_009699:3940984:3967191396719139685761386Clostridium botulinum F str. Langeland chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase family protein3e-1687
NC_017297:3939328:3964886396488639662711386Clostridium botulinum F str. 230613 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase family protein3e-1687
NC_009495:3832500:3858713385871338600981386Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase3e-1687
NC_009698:3706154:3732357373235737337421386Clostridium botulinum A str. Hall chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase3e-1687
NC_010520:3938490:3964704396470439660891386Clostridium botulinum A3 str. Loch Maree, complete genomepyridine nucleotide-disulphide oxidoreductase family protein3e-1687
NC_015738:1768951:1797750179775017991531404Eggerthella sp. YY7918, complete genomeFAD-dependent dehydrogenase3e-1687
NC_010516:3903867:3930066393006639314511386Clostridium botulinum B1 str. Okra, complete genomepyridine nucleotide-disulphide oxidoreductase family protein6e-1686.3
NC_016629:2561000:2574954257495425764561503Desulfovibrio africanus str. Walvis Bay chromosome, completeFAD dependent oxidoreductase2e-1584.7
NC_015589:3852217:3866804386680438682401437Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein4e-1480.1
NC_013943:2547966:2551401255140125527501350Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeFAD dependent oxidoreductase2e-1377.8
NC_005791:1028500:1050094105009410515451452Methanococcus maripaludis S2, complete genomehypothetical protein4e-1377
NC_006138:273237:2944812944812959861506Desulfotalea psychrophila LSv54, complete genomehypothetical protein9e-1375.5
NC_015847:1119666:1143136114313611445871452Methanococcus maripaludis XI chromosome, complete genomehypothetical protein1e-1275.5
NC_014363:114239:1279191279191293371419Olsenella uli DSM 7084 chromosome, complete genomeFAD dependent oxidoreductase5e-1273.2
NC_013741:302415:3040773040773054861410Archaeoglobus profundus DSM 5631, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase4e-1273.2
NC_015865:1260461:1281106128110612825721467Thermococcus sp. 4557 chromosome, complete genomedehydrogenase1e-0965.5
NC_013171:342714:3613833613833627561374Anaerococcus prevotii DSM 20548, complete genomehypothetical protein2e-0964.3
NC_012804:271459:2770452770452785081464Thermococcus gammatolerans EJ3, complete genomeOxidoreductase5e-0963.2