Pre_GI: BLASTP Hits

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Query: NC_012668:2258854:2292547 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 2292547, End: 2294460, Length: 1914

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:2997275:2998047299804729999571911Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeCBS domain and cyclic nucleotide-regulated nucleotidyltransferase0723
NC_014221:266638:2863722863722882311860Truepera radiovictrix DSM 17093 chromosome, complete genomeputative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase2e-128460
NC_004460:973738:9887549887549906191866Vibrio vulnificus CMCP6 chromosome II, complete sequencePredicted signal transduction protein2e-93343
NC_015387:1803938:1809880180988018116881809Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase1e-85318
NC_016616:2112211:2112211211221121141211911Dechlorosoma suillum PS chromosome, complete genomeputative signal-transduction protein containing cAMP-binding and CBS domains5e-75282
NC_011312:3060371:3068890306889030707221833Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completenucleotidyltransferases5e-63242
NC_016001:1893685:1897246189724618991531908Flavobacterium branchiophilum, complete genomehypothetical protein4e-60233
NC_011753:3088952:3097735309773530995581824Vibrio splendidus LGP32 chromosome 1, complete genomepredicted signal-transduction protein4e-59229
NC_015320:273979:2899842899842913691386Archaeoglobus veneficus SNP6 chromosome, complete genomeputative signal transduction protein2e-48194
NC_014532:2989185:2989185298918529909991815Halomonas elongata DSM 2581, complete genomeK07182 CBS domain-containing protein3e-48193
NC_015424:2462522:2481301248130124830881788Aeromonas veronii B565 chromosome, complete genomeputative signal-transduction protein containing cAMP-binding and CBS domains6e-43176
NC_008570:2216736:2263038226303822648251788Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecyclic nucleotide binding protein/2 CBS domains1e-42175
NC_013791:1323903:1339476133947613414041929Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein7e-41169
NC_008463:1912348:1947679194767919494781800Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative signal-transduction protein3e-39164
NC_008340:2272692:2272692227269222745601869Alkalilimnicola ehrlichei MLHE-1, complete genomecyclic nucleotide-binding protein7e-33142
NC_010814:1441327:1441327144132714425411215Geobacter lovleyi SZ, complete genomeprotein of unknown function DUF294 nucleotidyltransferase putative5e-25116
NC_015320:273979:2919572919572935071551Archaeoglobus veneficus SNP6 chromosome, complete genomeputative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase1e-20102
NC_008340:2272692:2274575227457522757021128Alkalilimnicola ehrlichei MLHE-1, complete genomeprotein of unknown function DUF294, nucleotidyltransferase putative8e-1995.9
NC_006510:591339:593171593171593617447Geobacillus kaustophilus HTA426, complete genomeinosine-5-monophosphate dehydrogenase9e-1272.4
NC_016593:596500:598361598361598807447Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeCBS domain-containing protein yhcV9e-1272.4
NC_016885:1217517:1225116122511612267051590Pyrobaculum oguniense TE7 chromosome, complete genomeputative signal transduction protein5e-1170.1
NC_014122:773825:775094775094775648555Methanocaldococcus infernus ME chromosome, complete genomeputative signal transduction protein with CBS domains5e-1170.1
NC_015703:4348545:436525843652584365698441Runella slithyformis DSM 19594 chromosome, complete genomeputative signal transduction protein with CBS domains2e-1068.2
NC_020054:3501467:350235035023503502940591Fibrella aestuarina BUZ 2 drat genomeputative signal transduction protein with CBS domains3e-1067.4
NC_003106:1786000:179085917908591791248390Sulfolobus tokodaii str. 7, complete genomehypothetical protein3e-1067.4
NC_014960:2111397:212214721221472122587441Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-1067.4
NC_003295:199354:206630206630207127498Ralstonia solanacearum GMI1000, complete genomehypothetical protein9e-1065.9
NC_014507:758820:763150763150763734585Methanoplanus petrolearius DSM 11571 chromosome, complete genomeputative signal transduction protein with CBS domains3e-0964.3
NC_014311:1545175:156807515680751568545471Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-0861.6
NC_007907:4859735:487753448775344878058525Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0859.7
NC_015474:538544:554570554570554980411Pyrococcus sp. NA2 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase related protein7e-0859.7
NC_003106:1809137:182458418245841825015432Sulfolobus tokodaii str. 7, complete genomehypothetical protein6e-0859.7
NC_007511:1147696:115407411540741154535462Burkholderia sp. 383 chromosome 2, complete sequenceputative signal-transduction protein with CBS domains8e-0859.3
NC_015574:2221220:223015022301502231100951Methanobacterium sp. SWAN-1 chromosome, complete genomeputative signal transduction protein with CBS domains9e-0859.3
NC_016070:743255:755881755881756300420Thermoproteus tenax Kra 1, complete genomehypothetical protein1e-0758.9
NC_011001:2085986:213812321381232138584462Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein1e-0758.9
NC_007347:1239982:124043112404311240895465Ralstonia eutropha JMP134 chromosome 1, complete sequenceCBS2e-0758.5
NC_010515:2691000:269543326954332695894462Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceputative signal-transduction protein with CBS domains2e-0758.2
NC_013132:4803460:481106548110654811427363Chitinophaga pinensis DSM 2588, complete genomeputative signal transduction protein with CBS domains3e-0757.8
NC_016885:603269:608539608539608967429Pyrobaculum oguniense TE7 chromosome, complete genomeputative signal transduction protein6e-0756.2
NC_015953:1860946:187531218753121875737426Streptomyces sp. SirexAA-E chromosome, complete genomeCBS domain containing protein1e-0655.5
NC_009376:1335074:134728613472861347714429Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomesignal-transduction protein1e-0655.1
NC_008701:195850:250616250616251044429Pyrobaculum islandicum DSM 4184, complete genomeputative signal-transduction protein with CBS domains2e-0655.1
NC_009440:217547:239905239905240330426Metallosphaera sedula DSM 5348 chromosome, complete genomesignal-transduction protein2e-0654.7
NC_003364:1081846:110785511078551108283429Pyrobaculum aerophilum str. IM2, complete genomeconserved protein with 2 CBS domains2e-0654.7
NC_011661:961129:967097967097967741645Dictyoglomus turgidum DSM 6724, complete genomeputative signal transduction protein with CBS domains5e-0653.5
NC_015865:229883:254649254649255059411Thermococcus sp. 4557 chromosome, complete genomehypothetical protein6e-0653.1
NC_013202:1947876:196675419667541967158405Halomicrobium mukohataei DSM 12286, complete genomeputative signal transduction protein with CBS domains6e-0653.1
NC_015574:2221220:223209922320992232665567Methanobacterium sp. SWAN-1 chromosome, complete genomeputative signal transduction protein with CBS domains7e-0653.1
NC_018664:239000:260398260398260781384Clostridium acidurici 9a chromosome, complete genomeCBS domain containing protein8e-0652.8
NC_013510:4319296:433699643369964337415420Thermomonospora curvata DSM 43183, complete genomeputative signal transduction protein with CBS domains9e-0652.8