Pre_GI: BLASTP Hits

Some Help

Query: NC_012668:2258854:2270139 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 2270139, End: 2270633, Length: 495

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:1623350:163336816333681633862495Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-80296
NC_012668:160357:178608178608179102495Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-80296
NC_015633:2919501:292864729286472929141495Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein7e-77285
NC_018678:554675:566300566300566755456Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein1e-29129
NC_006856:95830:106868106868107308441Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein5e-29126
NC_014541:4167916:417791141779114178363453Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein2e-23108