Pre_GI: BLASTP Hits

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Query: NC_012668:2258854:2264136 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 2264136, End: 2264414, Length: 279

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004603:1961432:196785119678511968264414Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative 6-pyruvoyl tetrahydrobiopterin synthase3e-48189
NC_009800:2889928:290944629094462909811366Escherichia coli HS, complete genomequeuosine biosynthesis protein QueD5e-41166
NC_010468:1029471:103082010308201031185366Escherichia coli ATCC 8739, complete genome6-pyruvoyl tetrahydropterin synthase5e-41166
NC_010473:2963951:298277829827782983143366Escherichia coli str. K-12 substr. DH10B, complete genome6-pyruvoyl tetrahydrobiopterin synthase (PTPS)5e-41166
NC_000913:2873443:289023628902362890601366Escherichia coli K12, complete genome6-pyruvoyl tetrahydrobiopterin synthase (PTPS)5e-41166
AC_000091:2872000:289087028908702891235366Escherichia coli W3110 DNA, complete genome6-pyruvoyl tetrahydrobiopterin synthase5e-41166
NC_012759:2757826:277604827760482776413366Escherichia coli BW2952 chromosome, complete genome6-pyruvoyl tetrahydrobiopterin synthase5e-41166
NC_014618:4114004:414869441486944149056363Enterobacter cloacae SCF1 chromosome, complete genome6-pyruvoyl-tetrahydropterin synthase6e-41165
NC_015224:889536:893451893451893813363Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative 6-pyruvoyl tetrahydrobiopterin synthase family protein2e-39160
AP010958:5272863:528024052802405280602363Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase2e-38157
NC_013353:5272863:528024052802405280602363Escherichia coli O103:H2 str. 12009, complete genome6-pyruvoyl tetrahydrobiopterin synthase2e-38157
NC_018419:226000:242890242890243252363Secondary endosymbiont of Ctenarytaina eucalypti chromosome,queuosine biosynthesis protein QueD3e-38156
NC_010717:4626178:465246646524664652828363Xanthomonas oryzae pv. oryzae PXO99A, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase6e-35145
NC_010688:4235528:426629842662984266651354Xanthomonas campestris pv. campestris, complete genome6-pyruvoyl tetrahydrobiopterin synthase7e-35145
NC_012751:1538500:155754815575481557928381Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete6-pyruvoyl tetrahydrobiopterin synthase (PTPS)9e-35145
NC_004578:3849835:386535438653543865710357Pseudomonas syringae pv. tomato str. DC3000, complete genome6-pyruvoyl tetrahydrobiopterin synthase, putative3e-34143
NC_007984:221030:234505234505234894390Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete6-pyruvoyl-tetrahydropterin synthase1e-31134
NC_019673:2155669:217391921739192174275357Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-31132
NC_013729:863743:896177896177896494318Kribbella flavida DSM 17836, complete genome1e-22104
NC_019907:845663:845663845663846019357Liberibacter crescens BT-1 chromosome, complete genomequeuosine biosynthesis protein QueD4e-1786.7
NC_012559:1064821:109198810919881092983996Laribacter hongkongensis HLHK9, complete genomeProbable 6-pyruvoyltetrahydrobiopterin synthase2e-1684.3
NC_014414:2467639:246881924688192469229411Parvularcula bermudensis HTCC2503 chromosome, complete genome6-pyruvoyl tetrahydrobiopterin synthase3e-1477
NC_008825:564392:564006564006564395390Methylibium petroleiphilum PM1, complete genomeputative 6-pyruvoyl tetrahydrobiopterin synthase3e-1373.9
NC_017082:532000:559133559133559564432Bradyrhizobium sp. S23321, complete genomehypothetical protein3e-1167
NC_017095:2143845:214959321495932149952360Fervidobacterium pennivorans DSM 9078 chromosome, complete genomequeuosine biosynthesis protein QueD5e-0960.1
NC_012881:3727150:374183037418303742216387Desulfovibrio salexigens DSM 2638, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein8e-0958.9
NC_014539:1:109591095911324366Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein1e-0858.5
NC_011059:921690:942104942104942553450Prosthecochloris aestuarii DSM 271, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein2e-0857.8
NC_009615:1469642:150928715092871509619333Parabacteroides distasonis ATCC 8503 chromosome, complete genome6-pyruvoyl tetrahydrobiopterin synthase2e-0858.2
NC_013889:413909:436175436175436558384Thioalkalivibrio sp. K90mix chromosome, complete genome6-pyruvoyl tetrahydropterin synthase and hypothetical protein2e-0858.2
NC_012883:104987:130375130375130722348Thermococcus sibiricus MM 739, complete genome6-pyruvoyl tetrahydropterin synthase1e-0755.1
NC_017195:1411936:141761314176131418053441Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeputative queuosine biosynthesis protein QueD1e-0755.1
NC_015500:900807:923483923483923881399Treponema brennaborense DSM 12168 chromosome, complete genomequeuosine biosynthesis protein QueD3e-0753.9
NC_007512:865500:867798867798868286489Pelodictyon luteolum DSM 273, complete genome6-pyruvoyltetrahydropterin synthase4e-0753.5
NC_020410:1301500:130488913048891305332444Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete6-carboxy-5,6,7,8-tetrahydropterin synthase; queuosine biosynthesis1e-0652
NC_017096:779550:798460798460798813354Caldisericum exile AZM16c01, complete genomeputative 6-pyruvoyl-tetrahydropterin synthase3e-0650.8
NC_010644:691374:691933691933692280348Elusimicrobium minutum Pei191, complete genomeputative 6-pyruvoyl tetrahydropterin synthase3e-0650.4
NC_016627:3815690:383156738315673831953387Clostridium clariflavum DSM 19732 chromosome, complete genomequeuosine biosynthesis protein QueD9e-0648.9
NC_006510:1501487:151067915106791511083405Geobacillus kaustophilus HTA426, complete genome6-pyruvoyltetrahydropterin synthase(PTP synthase)1e-0548.9