Pre_GI: BLASTP Hits

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Query: NC_012668:1623350:1646513 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1646513, End: 1646869, Length: 357

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015633:2565753:258163225816322581823192Vibrio anguillarum 775 chromosome chromosome I, complete sequencetranscriptional regulator3e-0650.4
NC_015633:2801321:281494328149432815329387Vibrio anguillarum 775 chromosome chromosome I, complete sequencetranscriptional regulator4e-1786.7
NC_012668:2258854:228328422832842283640357Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein9e-52201
NC_012668:160357:165601165601165957357Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein9e-52201
NC_016614:1178000:118461311846131184993381Vibrio sp. EJY3 chromosome 2, complete sequencetranscriptional regulator7e-1372.8