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Query: NC_012668:1623350:1631323 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1631323, End: 1633350, Length: 2028

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2258854:2268094226809422701212028Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01375
NC_012668:1688500:1750926175092617529532028Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01375
NC_015633:2919501:2929159292915929311772019Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein01061
NC_012668:160357:1791201791201803761257Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0828
NC_012668:160357:180366180366181148783Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-154547
NC_006856:95830:1048751048751068661992Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-115416
NC_018678:554675:5643255643255662981974Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein8e-114411
NC_014541:4167916:4175938417593841779141977Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein2e-86320
NC_014541:1753776:1766341176634117683742034Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein9e-39162
NC_009665:5072413:5080948508094850829992052Shewanella baltica OS185 chromosome, complete genomehypothetical protein7e-2099.4
NC_009997:5188221:5198075519807552001262052Shewanella baltica OS195, complete genomehypothetical protein2e-1998.2
NC_016901:5130147:5138697513869751407482052Shewanella baltica OS678 chromosome, complete genomehypothetical protein2e-1998.2
NC_011663:5016488:5025424502542450275472124Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-1997.8
NC_002505:168532:1843601843601864712112Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-1792
NC_012667:703852:7140867140867161972112Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-1792
NC_012668:442601:4525154525154546262112Vibrio cholerae MJ-1236 chromosome 1, complete sequencephage Integrase1e-1792
NC_016445:2593800:2609628260962826117392112Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephage integrase1e-1792
NC_016944:168530:1843581843581864692112Vibrio cholerae IEC224 chromosome I, complete sequencephage integrase2e-1688.6
NC_016613:2596464:2604864260486426070562193Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein4e-0963.9
NC_015633:338000:345982345982346920939Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein5e-0860.5
NC_004578:5336773:5368939536893953709872049Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family1e-0655.8