Pre_GI: BLASTP Hits

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Query: NC_012668:160357:182989 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 182989, End: 184614, Length: 1626

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2258854:2264628226462822662531626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01092
NC_012668:1688500:1747460174746017490851626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01092
NC_012668:1623350:1627857162785716294821626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01092
NC_015633:2919501:2933015293301529346431629Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein01085
NC_018678:554675:5609415609415624911551Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein4e-148525
NC_006856:95830:1014991014991030281530Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-143508
NC_006856:95830:1016371016371030281392Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein8e-137487
NC_014541:4167916:4172501417250141740631563Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein6e-120431
NC_014541:1753776:1770216177021617716521437Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein5e-22106
NC_011663:5016488:5022344502234450236811338Shewanella baltica OS223 chromosome, complete genomeintegrase family protein5e-1583.2
NC_016901:5130147:5135620513562051369451326Shewanella baltica OS678 chromosome, complete genomeintegrase family protein5e-1376.6
NC_009665:5072413:5077871507787150791961326Shewanella baltica OS185 chromosome, complete genomephage integrase family protein5e-1376.6
NC_009997:5188221:5193694519369451950191326Shewanella baltica OS195, complete genomeintegrase family protein5e-1376.6
NC_015633:338000:3508423508423520561215Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase6e-1272.8
NC_016445:2593800:2613434261343426146361203Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein6e-1272.8
NC_012668:442601:4496064496064508201215Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-1272.8
NC_002505:168532:1881661881661893801215Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransposase, putative7e-1272.8
NC_016944:168530:1881641881641893781215Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-1067.4