Pre_GI: BLASTP Hits

Some Help

Query: NC_012668:160357:168333 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 168333, End: 168542, Length: 210

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2258854:228069922806992280908210Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-32138
NC_012668:1623350:164392816439281644137210Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-32138
NC_015633:2565753:258423625842362584445210Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-23107
NC_010506:4873487:488892448889244889130207Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, XRE family7e-1889.4
NC_016901:5130147:515172851517285151934207Shewanella baltica OS678 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1889.4
NC_009665:5072413:509397950939795094185207Shewanella baltica OS185 chromosome, complete genomeXRE family transcriptional regulator7e-1889.4
NC_009997:5188221:521110652111065211312207Shewanella baltica OS195, complete genometranscriptional regulator, XRE family7e-1889.4
NC_010334:609636:626708626708626914207Shewanella halifaxensis HAW-EB4, complete genometranscriptional regulator, XRE family7e-1889.4
NC_009901:2272206:229964522996452299851207Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, XRE family2e-1788.2
NC_009901:4216206:422500142250014225207207Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, XRE family2e-1788.2
NC_004347:4007847:401423640142364014463228Shewanella oneidensis MR-1, complete genometranscriptional regulator, Cro/CI family3e-1787.4
NC_009434:695582:749946749946750173228Pseudomonas stutzeri A1501, complete genomeCro/CI family transcriptional regulator6e-1786.3
NC_009656:44500:901009010090321222Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein6e-1682.8
NC_020829:940692:947744947744947956213Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein3e-1580.1
NC_008740:220642:235926235926236135210Marinobacter aquaeolei VT8, complete genome8e-1475.9
NC_018868:619113:654559654559654795237Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeCro/CI family transcriptional regulator7e-1269.3
NC_010682:460523:491925491925492170246Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, XRE family3e-1063.9
NC_007508:2941889:295324729532472953522276Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-0961.2
NC_007651:3560652:357327135732713573513243Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-binding protein5e-0960.1
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein5e-0959.7
NC_016641:1530905:154211415421141542458345Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator sinR7e-0856.2
NC_011000:1262324:130345613034561303824369Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein7e-0855.8
NC_009439:1297851:133053813305381330783246Pseudomonas mendocina ymp, complete genomeXRE family transcriptional regulator1e-0755.5
NC_007510:3340008:334567233456723345986315Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family1e-0755.1
NC_016641:2894899:291399229139922914339348Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator1e-0755.1
NC_014483:1146682:114946911494691149816348Paenibacillus polymyxa E681 chromosome, complete genomePutative HTH-type transcriptional regulator2e-0754.7
NC_014965:997344:101503010150301015260231Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein3e-0753.9
NC_020260:440000:450272450272450733462Cronobacter sakazakii Sp291, complete genomeXRE family transcriptional regulator4e-0753.5
NC_014844:511552:515402515402515728327Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0753.5
NC_017075:4880807:488612248861224886376255Rubrivivax gelatinosus IL144, complete genometranscriptional regulator, Xre family5e-0753.1
NC_010424:697187:744858744858745595738Candidatus Desulforudis audaxviator MP104C, complete genomeputative prophage repressor5e-0753.1
NC_014622:5683400:568480656848065685150345Paenibacillus polymyxa SC2 chromosome, complete genometranscription factor,eukaryotic mbf15e-0753.1
NC_015677:285896:300214300214300459246Ramlibacter tataouinensis TTB310 chromosome, complete genomeXRE family transcriptional regulator5e-0753.1
NC_007650:2429307:245966124596612459864204Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein6e-0752.8
NC_010002:2518599:253459725345972534992396Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family6e-0752.8
NC_016616:2997348:300945030094503009686237Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator6e-0752.8
NC_010512:1015557:102764110276411027886246Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, XRE family1e-0652.4
NC_008542:1021848:103003110300311030429399Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, XRE family9e-0752.4
NC_010322:4623867:467058446705844670829246Pseudomonas putida GB-1 chromosome, complete genomeXRE family transcriptional regulator9e-0752.4
NC_008322:373531:373304373304373534231Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family9e-0752.4
NC_012912:1701231:171734517173451717590246Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family8e-0752.4
NC_016002:2946702:296578929657892966139351Pseudogulbenkiania sp. NH8B, complete genomehelix-turn-helix domain containing protein8e-0752.4
NC_014500:3097362:313932931393293139574246Dickeya dadantii 3937 chromosome, complete genomehypothetical protein8e-0752.4
NC_012912:1053618:106326310632631063553291Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family1e-0652
NC_009720:4406991:444623344462334446451219Xanthobacter autotrophicus Py2, complete genomeXRE family transcriptional regulator1e-0652
NC_004459:2025436:203074620307462030976231Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator1e-0652
NC_007510:1959883:200793820079382008219282Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family1e-0652
NC_008061:2582000:259167425916742591919246Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, XRE family1e-0652
NC_008543:2666846:267507026750702675315246Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, XRE family1e-0652
NC_009674:840000:860115860115860324210Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0651.6
NC_014483:4740214:474950147495014749890390Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator1e-0651.6
NC_014216:2860342:286928428692842869517234Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometranscriptional regulator, XRE family2e-0651.6
NC_009339:149805:149805149805150083279Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequenceXRE family transcriptional regulator2e-0651.6
NC_007650:2429307:245827324582732458473201Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein2e-0651.2
NC_006351:520500:521079521079521324246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein2e-0651.2
NC_014006:3124818:313237831323783132620243Sphingobium japonicum UT26S chromosome 1, complete genomeXre-family transcriptional regulator2e-0651.2
NC_015572:1:100251002510264240Methylomonas methanica MC09 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0651.2
NC_006351:520500:522475522475522720246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein2e-0650.8
NC_014622:5683400:568439956843995684743345Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator3e-0650.8
NC_015572:4916430:492508549250854925324240Methylomonas methanica MC09 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0650.4
NC_020409:1173796:118106611810661181392327Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, XRE family4e-0650.4
NC_007951:2233676:225294022529402253398459Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted transcriptional regulator, XRE family5e-0650.1
NC_009512:3282500:330922433092243309568345Pseudomonas putida F1, complete genometranscriptional regulator, XRE family5e-0650.1
NC_015590:145353:152549152549152821273Sinorhizobium meliloti AK83 chromosome 1, complete sequencehelix-turn-helix domain-containing protein5e-0650.1
NC_016641:872394:881627881627881998372Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator4e-0650.1
NC_003047:536151:546632546632546901270Sinorhizobium meliloti 1021, complete genomeHYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN4e-0650.1
NC_011662:2402408:240955324095532409810258Thauera sp. MZ1T, complete genometranscriptional regulator, XRE family4e-0650.1
NC_009667:1371924:137862013786201378910291Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator6e-0649.7
NC_015177:1476073:150000515000051500232228Pedobacter saltans DSM 12145 chromosome, complete genomehelix-turn-helix domain protein8e-0649.3
NC_013132:782846:785123785123785347225Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family8e-0649.3
NC_018691:3041851:306006930600693060359291Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator8e-0649.3
NC_010571:1334000:133858213385821338833252Opitutus terrae PB90-1, complete genometranscriptional regulator, XRE family9e-0648.9
NC_012968:239476:241214241214241558345Methylotenera mobilis JLW8, complete genometranscriptional regulator, XRE family9e-0648.9