Pre_GI: BLASTP Hits

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Query: NC_012667:931390:981463 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 981463, End: 981927, Length: 465

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:404140404140404604465Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein5e-87319
NC_016446:49618:104860104860105324465Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein5e-87319
NC_012583:361241:415606415606416070465Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein5e-87319
NC_009456:787322:847872847872848336465Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein5e-87319
NC_002506:370629:404320404320404784465Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein5e-87319
NC_016901:3430401:343893334389333439385453Shewanella baltica OS678 chromosome, complete genomehypothetical protein3e-1270.9
NC_009997:2585588:259325625932562593708453Shewanella baltica OS195, complete genomehypothetical protein3e-1270.9
NC_009997:3483157:349168934916893492141453Shewanella baltica OS195, complete genomehypothetical protein3e-1270.9