Pre_GI: BLASTP Hits

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Query: NC_012667:931390:965057 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 965057, End: 965200, Length: 144

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:931390:992955992955993101147Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein3e-1063.9
NC_016446:49618:631836318363335153Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-0960.8
NC_012667:931390:102345210234521023604153Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-0960.8
NC_016945:370471:412782412782413126345Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein6e-0959.3
NC_016446:49618:854228542285568147Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein8e-0959.3
NC_012667:931390:100121910012191001365147Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein8e-0959.3
NC_016446:49618:547225472254868147Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-0858.2
NC_012667:931390:101212510121251012253129Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-0857.8
NC_002506:370629:387942387942388301360Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-0857
NC_016945:370471:387761387761388120360Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-0857
NC_016446:49618:562065620656328123Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-0857
NC_012667:931390:97556397556397566199Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein4e-0856.6
NC_012667:931390:93471193471193480696Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein6e-0856.2
NC_016446:26500:419174191742045129Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein8e-0855.8
NC_016446:119914:12217012217012226596Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-0755.5
NC_016446:49618:882608826088364105Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein9e-0855.5
NC_012667:931390:973889973889974038150Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-0755.1
NC_012667:931390:99359199359199368999Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-0755.1
NC_016446:49618:100380100380100508129Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-0753.5
NC_012667:931390:986279986279986407129Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein4e-0753.5