Pre_GI: BLASTP Hits

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Query: NC_012667:931390:935327 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 935327, End: 935848, Length: 522

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017269:303500:328338328338328859522Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein4e-99359
NC_016945:370471:431124431124431645522Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-99359
NC_016446:119914:131846131846132367522Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-99359
NC_012583:440420:460002460002460523522Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein4e-99359
NC_009456:787322:803419803419803940522Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein4e-99359
NC_002506:370629:431305431305431826522Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-99359
NC_012580:301500:326833326833327354522Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein1e-98358
NC_012779:1939747:195063719506371951149513Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-47187