Pre_GI: BLASTP Hits

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Query: NC_012667:839318:840277 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 840277, End: 840729, Length: 453

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013501:1691532:171136217113621711799438Rhodothermus marinus DSM 4252, complete genomethioesterase superfamily protein1e-38158
NC_007606:1515403:153464215346421535052411Shigella dysenteriae Sd197, complete genomehypothetical protein3e-35147
NC_015410:2505168:251109925110992511542444Pseudomonas mendocina NK-01 chromosome, complete genomethioesterase superfamily protein9e-32135
NC_009092:3783000:380123438012343801683450Shewanella loihica PV-4, complete genomeuncharacterized domain 1 protein2e-31134
NC_009767:2866668:287209928720992872527429Roseiflexus castenholzii DSM 13941, complete genomethioesterase superfamily protein4e-31133
NC_017192:88940:100137100137100565429Arcobacter sp. L, complete genomehypothetical protein5e-31133
NC_013722:1785692:178519217851921785695504Xanthomonas albilineans, complete genomeputative ydII esterase protein3e-30130
NC_017200:4697500:470008747000874700470384Bacillus thuringiensis serovar finitimus YBT-020 chromosome,comA operon protein6e-30129
NC_004722:4824818:482623448262344826617384Bacillus cereus ATCC 14579, complete genomeComA operon protein 25e-30129
NC_014171:4740500:474218047421804742563384Bacillus thuringiensis BMB171 chromosome, complete genomeComA operon protein 25e-30129
NC_005945:4670978:467543246754324675815384Bacillus anthracis str. Sterne, complete genomecomA operon protein, putative1e-29128
NC_003997:4674209:467420946742094674592384Bacillus anthracis str. Ames, complete genomecomA operon protein, putative1e-29128
NC_014335:4622500:462556846255684625951384Bacillus cereus biovar anthracis str. CI chromosome, completethioesterase superfamily protein1e-29128
NC_012472:4691251:469431246943124694695384Bacillus cereus 03BB102, complete genomeputative comA operon protein1e-29128
NC_006274:4742489:474554947455494745932384Bacillus cereus E33L, complete genomecomA operon protein (competence protein)1e-29128
NC_007530:4674335:467433546743354674718384Bacillus anthracis str. 'Ames Ancestor', complete genomecoma operon protein, putative1e-29128
NC_011773:4732457:473551847355184735901384Bacillus cereus AH820 chromosome, complete genomeputative comA operon protein1e-29128
NC_012659:4674235:467423546742354674618384Bacillus anthracis str. A0248, complete genomeputative comA operon protein1e-29128
NC_016779:4645155:464821646482164648599384Bacillus cereus F837/76 chromosome, complete genomecomA operon protein1e-29128
NC_011969:4613430:461649446164944616877384Bacillus cereus Q1 chromosome, complete genomecoma operon protein (competence protein)1e-29128
NC_008600:4687500:469059346905934690997405Bacillus thuringiensis str. Al Hakam, complete genomecomA operon protein2e-29127
NC_011658:4672000:467508346750834675466384Bacillus cereus AH187 chromosome, complete genomeputative comA operon protein7e-29125
NC_006322:3198829:320463532046353205024390Bacillus licheniformis ATCC 14580, complete genomeYuxO1e-27122
NC_009613:781180:782249782249782677429Flavobacterium psychrophilum JIP02/86, complete genomehypothetical protein1e-26118
NC_013521:2254534:225723822572382257651414Sanguibacter keddieii DSM 10542, complete genomehypothetical protein6e-24109
NC_018524:4049990:407522040752204075663444Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein2e-23107
NC_014830:1871135:187113518711351871554420Intrasporangium calvum DSM 43043 chromosome, complete genomethioesterase superfamily protein3e-23107
NC_015953:1581542:159166115916611592131471Streptomyces sp. SirexAA-E chromosome, complete genomethioesterase superfamily protein2e-22104
NC_021177:1736854:174493017449301745400471Streptomyces fulvissimus DSM 40593, complete genomeThioesterase superfamily protein2e-22104
NC_010572:6463939:649109464910946491564471Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-22104
NC_003155:7453994:747883274788327479293462Streptomyces avermitilis MA-4680, complete genomehypothetical protein7e-22102
NC_016114:5539021:556504555650455565515471Streptomyces flavogriseus ATCC 33331 chromosome, complete genomethioesterase3e-21100
NC_014643:1986440:202624420262442026708465Rothia dentocariosa ATCC 17931 chromosome, complete genomethioesterase5e-2199.8
NC_015144:367278:370368370368370784417Weeksella virosa DSM 16922 chromosome, complete genomephenylacetic acid degradation-related protein4e-2096.7
NC_008278:5012000:501217550121755012891717Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative Thioesterase and Phenylacetic acid degradation domains8e-2095.9
NC_014761:1196669:121862912186291219054426Oceanithermus profundus DSM 14977 chromosome, complete genomethioesterase superfamily protein2e-1994.7
NC_013510:3324978:332914933291493329607459Thermomonospora curvata DSM 43183, complete genomethioesterase superfamily protein5e-1890.1
NC_021182:2013500:201600520160052016394390Clostridium pasteurianum BC1, complete genomehypothetical protein6e-1786.3
NC_009615:1305678:1308655130865513098871233Parabacteroides distasonis ATCC 8503 chromosome, complete genomehaloacid dehalogenase7e-1786.3
NC_016610:61661:6247862478637101233Tannerella forsythia ATCC 43037 chromosome, complete genomecof family hydrolase2e-1685.1
NC_006138:273237:276059276059276496438Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-1479
NC_015164:3431279:344436834443683444796429Bacteroides salanitronis DSM 18170 chromosome, complete genomephenylacetic acid degradation-like protein3e-1063.9
NC_013194:2788299:278956627895662790006441Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completethioesterase superfamily protein1e-0962
NC_010545:236000:247013247013247435423Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-0961.6
NC_007974:1717828:173064217306421731070429Ralstonia metallidurans CH34 chromosome 2, complete sequencePhenylacetic acid degradation-related protein4e-0857
NC_013204:929434:929015929015929437423Eggerthella lenta DSM 2243, complete genomethioesterase superfamily protein5e-0856.6