Pre_GI: BLASTP Hits

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Query: NC_012667:703852:703852 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 703852, End: 707007, Length: 3156

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018868:619113:6191136191136225713459Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeglycosyl hydrolase family chitinase0990
NC_010995:1139867:1163789116378911664612673Cellvibrio japonicus Ueda107, complete genomeendo-chitinase, putative, chi18B0719
NC_010674:615963:6159636159636181162154Clostridium botulinum B str. Eklund 17B, complete genomechitinase A6e-85316
NC_021171:608315:6083156083156101231809Bacillus sp. 1NLA3E, complete genomechitinase2e-48194
NC_011898:1880960:1899237189923719006851449Clostridium cellulolyticum H10, complete genomeglycoside hydrolase family 187e-38160
NC_014484:1690272:1735547173554717374811935Spirochaeta thermophila DSM 6192 chromosome, complete genomeglycosyl hydrolases family 182e-36155
NC_015061:3725921:3736946373694637398132868Rahnella sp. Y9602 chromosome, complete genomeglycoside hydrolase family 181e-35152
NC_017047:3793000:3801607380160738044742868Rahnella aquatilis HX2 chromosome, complete genomeglycoside hydrolase1e-35152
NC_013716:4728500:4741124474112447433282205Citrobacter rodentium ICC168, complete genomeputative polysaccharide degrading enzyme4e-34147
NC_014410:2329838:2348586234858623503011716Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,glycoside hydrolase family 184e-34147
NC_013716:4728500:4736113473611347383382226Citrobacter rodentium ICC168, complete genomeputative polysaccharide degrading enzyme6e-34147
NC_016818:362548:3703043703043725082205Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completechitinase2e-33144
NC_013716:4728500:4738734473873447406201887Citrobacter rodentium ICC168, complete genomeputative polysaccharide degrading enzyme4e-33144
NC_011660:2509362:2509362250936225116442283Listeria monocytogenes HCC23 chromosome, complete genomechitinase B6e-30133
NC_014376:3547218:3551875355187535533381464Clostridium saccharolyticum WM1 chromosome, complete genomeglycoside hydrolase family 183e-28128
NC_004460:1313468:1314417131441713169542538Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein1e-27125
NC_011663:1500772:1519493151949315220992607Shewanella baltica OS223 chromosome, complete genomeglycoside hydrolase3e-27124
NC_007677:3469661:3471034347103434721971164Salinibacter ruber DSM 13855, complete genomechitinase A1 precursor5e-26120
NC_018868:619113:6226396226396242191581Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomechitinase2e-25119
NC_012483:30784:5296852968555742607Acidobacterium capsulatum ATCC 51196, complete genomechitinase A4e-24114
NC_016109:2938000:2946797294679729481281332Kitasatospora setae KM-6054, complete genomechitinase1e-23113
NC_017093:1411532:1417105141710514183821278Actinoplanes missouriensis 431, complete genomeputative glycosyl hydrolase8e-20100
NC_007954:2440000:2456923245692324583201398Shewanella denitrificans OS217, complete genomeglycoside hydrolase, family 184e-1997.8
NC_019892:3086493:3097909309790930990421134Singulisphaera acidiphila DSM 18658 chromosome, complete genomechitinase2e-1895.1
NC_018750:5078705:5101561510156151028981338Streptomyces venezuelae ATCC 10712, complete genomeChitinase1e-1793.2
NC_010336:213148:2252332252332279112679Francisella philomiragia subsp. philomiragia ATCC 25017, completechitinase, glycosyl hydrolase family 183e-1791.7
NC_015957:3282183:3302966330296633042431278Streptomyces violaceusniger Tu 4113 chromosome, complete genomeglycoside hydrolase family protein1e-1689.7
NC_018750:5399316:5412029541202954137891761Streptomyces venezuelae ATCC 10712, complete genomeChitinase2e-1688.6
NC_012918:2850755:2859325285932528629843660Geobacter sp. M21 chromosome, complete genomefibronectin type III domain-containing protein9e-1686.7
NC_014318:5586287:5589925558992555921382214Amycolatopsis mediterranei U32 chromosome, complete genomechitinase3e-1585.1
NC_017186:5586328:5589966558996655921792214Amycolatopsis mediterranei S699 chromosome, complete genomechitinase3e-1585.1
NC_014933:3856561:3865514386551438672471734Bacteroides helcogenes P 36-108 chromosome, complete genomeChitinase4e-1584.7
NC_015510:6653159:6691694669169466926951002Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeChitinase4e-1584.7
NC_013456:3011518:3015502301550230172051704Vibrio sp. Ex25 chromosome 1, complete genomechitinase8e-1583.6
NC_016602:2854107:2861018286101828626221605Vibrio furnissii NCTC 11218 chromosome 1, complete sequencechitinase1e-1379.7
NC_013174:1459730:1478197147819714801521956Jonesia denitrificans DSM 20603, complete genomeChitinase2e-1378.6
NC_002939:2124642:2130067213006721332103144Geobacter sulfurreducens PCA, complete genomefibronectin type III domain protein4e-1377.8
NC_014973:1992694:2011824201182420138842061Geobacter sp. M18 chromosome, complete genomeFibronectin type III domain-containing protein7e-1377
NC_013132:6385223:6385223638522363884023180Chitinophaga pinensis DSM 2588, complete genomeLicheninase6e-1377
NC_014623:1273025:1273025127302512745871563Stigmatella aurantiaca DW4/3-1 chromosome, complete genomechitinase c1e-1275.9
NC_009483:2640403:2690399269039926918471449Geobacter uraniireducens Rf4 chromosome, complete genomefibronectin I domain-containing protein2e-1275.9
NC_021177:5697210:5717921571792157197951875Streptomyces fulvissimus DSM 40593, complete genomeChitinase III7e-1273.6
NC_012483:30784:5154251542528281287Acidobacterium capsulatum ATCC 51196, complete genomechitinase A8e-1273.6
NC_014121:2514544:2516383251638325176391257Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative chitinase II2e-1172
NC_008609:2643000:2643892264389226453911500Pelobacter propionicus DSM 2379, complete genomeFibronectin, type III domain protein1e-0966.2
NC_015690:1967244:1995344199534419985653222Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein4e-0964.3
NC_016935:2503071:2528230252823025339025673Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein6e-0963.9
NC_015690:1772015:1772015177201517760674053Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXynA1e-0862.8
NC_016935:2302055:2302055230205523061074053Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein XynA1e-0862.8
NC_009483:3480740:34807403480740349502514286Geobacter uraniireducens Rf4 chromosome, complete genomeLamG domain-containing protein2e-0862.4
NC_016612:2223357:2237367223736722394662100Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-0862
NC_013729:1556922:1557945155794515656337689Kribbella flavida DSM 17836, complete genomeYD repeat protein3e-0758.5
NC_010814:1551624:1551624155162415564294806Geobacter lovleyi SZ, complete genomemulticopper oxidase type 23e-0758.2
NC_014973:1992694:2018772201877220200731302Geobacter sp. M18 chromosome, complete genomeFibronectin type III domain-containing protein5e-0757.8
NC_009483:2640403:2692360269236026943872028Geobacter uraniireducens Rf4 chromosome, complete genomefibronectin I domain-containing protein6e-0757.4
NC_007498:1774859:1774859177485917779543096Pelobacter carbinolicus DSM 2380, complete genomepectate lyase protein8e-0757
NC_014210:2747787:2769071276907127734054335Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF10801e-0656.2
NC_013132:6385223:6388702638870263921003399Chitinophaga pinensis DSM 2588, complete genomeCarbohydrate binding family 62e-0655.5
NC_020541:1510782:1519890151989015236963807Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein5e-0654.3