Pre_GI: BLASTP Hits

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Query: NC_012667:46432:69347 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 69347, End: 69592, Length: 246

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004347:4211241:422810042281004228348249Shewanella oneidensis MR-1, complete genomehypothetical protein7e-1062.8
NC_017512:1264542:127956812795681279789222Neisseria meningitidis WUE 2594, complete genomehypothetical protein1e-0652
NC_017516:917817:922321922321922542222Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein1e-0652
NC_017517:1377617:139396013939601394181222Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein2e-0651.6
NC_017511:950411:966290966290966511222Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein2e-0651.6
CP002185:3627992:365140036514003651618219Escherichia coli W, complete genomeconserved protein7e-0649.3