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Query: NC_012667:1045782:1056197 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 1056197, End: 1057450, Length: 1254

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002506:298868:3029263029263041491224Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein0776
NC_012583:335000:3377893377893390181230Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein0774
NC_012580:301500:3041133041133053481236Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein0771
NC_016945:300000:3029233029233041161194Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein0761
NC_016446:26500:2935329353305941242Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein0760
NC_011742:4655373:4660479466047946620771599Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1067.8
NC_008563:4739333:4745961474596147474151455Escherichia coli APEC O1, complete genomehypothetical protein1e-1067.8
NC_013716:5201097:5257052525705252586681617Citrobacter rodentium ICC168, complete genomehypothetical protein3e-1066.6
NC_009792:3245368:3280853328085332822231371Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0963.2
NC_013941:3300000:3329451332945133306951245Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein7e-0858.9
NC_013008:3525428:3550716355071635519241209Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-0858.9
NC_002695:3468873:3491695349169534929631269Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0758.2
NC_014562:2563466:2589710258971025908671158Pantoea vagans C9-1 chromosome, complete genomehypothetical protein5e-0756.2
NC_002655:3538656:355933835593383560246909Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-0654.7