Pre_GI: BLASTP Hits

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Query: NC_012667:1045782:1050678 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 1050678, End: 1051031, Length: 354

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:26500:357603576036113354Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete50S ribosomal protein L204e-59226
NC_016857:1358456:137187313718731372229357Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7450S ribosomal protein L204e-46182
NC_016810:1358456:137187313718731372229357Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L204e-46182
NC_011205:1938574:194226219422621942618357Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185350S ribosomal protein L204e-46182
NC_006511:1579776:158346415834641583820357Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L204e-46182
NC_012560:2026483:203701920370192037375357Azotobacter vinelandii DJ, complete genome50S ribosomal protein L202e-45181
NC_009656:2512733:251548625154862515842357Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L202e-45180
NC_015222:2089767:210056721005672100926360Nitrosomonas sp. AL212 chromosome, complete genome50S ribosomal protein L205e-44176
NC_018868:569423:612411612411612767357Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome50S ribosomal protein L207e-43172
NC_003902:2903493:292258029225802922939360Xanthomonas campestris pv. campestris str. ATCC 33913, complete50S ribosomal protein L203e-40163
NC_017515:1527461:153917915391791539538360Neisseria meningitidis M04-240196 chromosome, complete genome50S ribosomal protein L204e-39159
NC_007298:2856104:287151428715142871873360Dechloromonas aromatica RCB, complete genome50S ribosomal protein L204e-39159
NC_015565:1163148:117718111771811177537357Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete50S ribosomal protein L204e-38156
NC_014328:3747973:376682837668283767187360Clostridium ljungdahlii ATCC 49587 chromosome, complete genome50S ribosomal protein L208e-34142
NC_016622:82418:956649566496035372Azospirillum lipoferum 4B, complete genome50S ribosomal protein L202e-32137
NC_015844:3524175:352596535259653526309345Zobellia galactanivorans, complete genome50S ribosomal protein L203e-29126
NC_016631:297222:297222297222297599378Granulicella mallensis MP5ACTX8 chromosome, complete genome50S ribosomal protein L207e-29125
NC_015318:290849:297321297321297668348Hippea maritima DSM 10411 chromosome, complete genome50S ribosomal protein L202e-27120
NC_018497:214500:236057236057236431375Mycoplasma genitalium M6320 chromosome, complete genome50S ribosomal protein L204e-24110
NC_016945:300000:309282309282309635354Vibrio cholerae IEC224 chromosome II, complete sequence50S ribosomal protein L204e-59226
NC_002506:298868:309315309315309668354Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete50S ribosomal protein L204e-59226
NC_016860:1399290:141270714127071413063357Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L204e-46182
NC_016831:1166868:118028211802821180638357Salmonella enterica subsp. enterica serovar Gallinarum/pullorum50S ribosomal protein L204e-46182
NC_011274:1850086:185377418537741854130357Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9150S ribosomal protein L204e-46182
NC_004129:2328491:233366723336672334023357Pseudomonas fluorescens Pf-5, complete genome50S ribosomal protein L204e-46182
NC_016002:1326500:132966913296691330025357Pseudogulbenkiania sp. NH8B, complete genome50S ribosomal protein L209e-46181
NC_018080:2288700:229145322914532291809357Pseudomonas aeruginosa DK2 chromosome, complete genome50S ribosomal protein L202e-45180
NC_002516:3079850:310364331036433103999357Pseudomonas aeruginosa PAO1, complete genome50S ribosomal protein L202e-45180
NC_008702:1153344:116548511654851165844360Azoarcus sp. BH72, complete genome50S ribosomal protein L202e-44177
NC_017271:2906000:292510629251062925465360Xanthomonas campestris pv. raphani 756C chromosome, complete50S ribosomal protein L203e-40163
NC_017518:828662:831471831471831830360Neisseria meningitidis NZ-05/33 chromosome, complete genome50S ribosomal protein L204e-39159
NC_013016:656000:665277665277665636360Neisseria meningitidis alpha14 chromosome, complete genome50S ribosomal protein L204e-39159
NC_017046:1358531:137199913719991372304306Salmonella enterica subsp. enterica serovar Typhimurium str. 79850S ribosomal protein L203e-38156
NC_007517:1561466:158226015822601582613354Geobacter metallireducens GS-15, complete genome50S ribosomal protein L202e-34144
NC_009483:3024115:305118930511893051542354Geobacter uraniireducens Rf4 chromosome, complete genome50S ribosomal protein L202e-33140
NC_007205:424500:434530434530434886357Candidatus Pelagibacter ubique HTCC1062, complete genome50S ribosomal protein L201e-32138
NC_015638:23654:400304003040374345Lacinutrix sp. 5H-3-7-4 chromosome, complete genome50S ribosomal protein L202e-29127
NC_014169:1442435:144456214445621444945384Bifidobacterium longum subsp. longum JDM301 chromosome, complete50S ribosomal protein L202e-26117
NC_012580:301500:310514310514310867354Vibrio cholerae M66-2 chromosome II, complete sequence50S ribosomal protein L204e-59226
NC_016863:1359769:137318613731861373542357Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L204e-46182
NC_016832:1269018:128243612824361282792357Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,50S ribosomal protein L204e-46182
NC_011283:2185462:220951022095102209866357Klebsiella pneumoniae 342 chromosome, complete genome50S ribosomal protein L204e-46182
NC_003198:1693623:169731116973111697667357Salmonella enterica subsp. enterica serovar Typhi str. CT18,50S ribosomal protein L204e-46182
NC_004631:1271500:128346312834631283819357Salmonella enterica subsp. enterica serovar Typhi Ty2, complete50S ribosomal protein L204e-46182
NC_003197:1401603:141502014150201415376357Salmonella typhimurium LT2, complete genome50S ribosomal protein L204e-46182
NC_015410:3209954:322534532253453225701357Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L208e-46182
NC_012660:4558122:458854445885444588900357Pseudomonas fluorescens SBW25 chromosome, complete genome50S ribosomal protein L202e-45180
NC_008463:2467219:246997224699722470328357Pseudomonas aeruginosa UCBPP-PA14, complete genome50S ribosomal protein L202e-45180
NC_018691:3525430:357194735719473572306360Alcanivorax dieselolei B5 chromosome, complete genome50S ribosomal protein L208e-45178
NC_015731:867377:913036913036913395360Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L202e-43174
NC_004757:1021355:104092810409281041287360Nitrosomonas europaea ATCC 19718, complete genome50S ribosomal protein L201e-40165
NC_003112:744476:753852753852754211360Neisseria meningitidis MC58, complete genome50S ribosomal protein L207e-39159
NC_002939:1634843:166491816649181665271354Geobacter sulfurreducens PCA, complete genome50S ribosomal protein L208e-33139
NC_006831:211947:216861216861217232372Ehrlichia ruminantium str. Gardel, complete genome50S ribosomal protein L202e-31134
NC_015144:1333179:134209113420911342435345Weeksella virosa DSM 16922 chromosome, complete genome50S ribosomal protein L202e-30131
NC_015167:2700218:270311927031192703463345Cellulophaga lytica DSM 7489 chromosome, complete genome50S ribosomal protein L201e-29128
NC_007413:4278252:427825242782524278608357Anabaena variabilis ATCC 29413, complete genome50S ribosomal protein L202e-23107
NC_004432:1225077:122635112263511226698348Mycoplasma penetrans HF-2, complete genome50S ribosomal protein L209e-1889
NC_016856:1411579:142499614249961425352357Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S50S ribosomal protein L204e-46182
NC_011294:1810285:181397318139731814329357Salmonella enterica subsp. enterica serovar Enteritidis str50S ribosomal protein L204e-46182
NC_011147:1573470:157864515786451579001357Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L204e-46182
NC_002947:2809591:281234728123472812703357Pseudomonas putida KT2440, complete genome50S ribosomal protein L206e-46182
NC_021150:2026496:203703220370322037388357Azotobacter vinelandii CA6, complete genome50S ribosomal protein L202e-45181
NC_011770:2499432:249965024996502500006357Pseudomonas aeruginosa LESB58, complete genome50S ribosomal protein L202e-45180
NC_009434:2577717:258859125885912588947357Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L206e-45179
NC_007086:1988000:198828019882801988639360Xanthomonas campestris pv. campestris str. 8004, complete genome50S ribosomal protein L203e-40163
NC_017514:1491235:150295315029531503312360Neisseria meningitidis M01-240149 chromosome, complete genome50S ribosomal protein L204e-39159
NC_017516:1535904:155107915510791551438360Neisseria meningitidis H44/76 chromosome, complete genome50S ribosomal protein L207e-39159
NC_019903:175481:176174176174176536363Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,50S ribosomal protein L207e-33139
NC_014833:3444550:345446234544623454815354Ruminococcus albus 7 chromosome, complete genome50S ribosomal protein L208e-31132
NC_012796:1049034:117459511745951174948354Desulfovibrio magneticus RS-1, complete genome50S ribosomal protein L201e-29128
NC_014974:758129:780161780161780517357Thermus scotoductus SA-01 chromosome, complete genome50S ribosomal protein L204e-29126
NC_014472:294775:312240312240312584345Flavobacteriales bacterium HTCC2170 chromosome, complete genome50S ribosomal protein L201e-28124
NC_014448:626909:636560636560636919360Mycoplasma hyorhinis HUB-1 chromosome, complete genome50S ribosomal protein L204e-27119
NC_015703:6295500:629564262956426295986345Runella slithyformis DSM 19594 chromosome, complete genome50S ribosomal protein L204e-26116
NC_000908:215000:236247236247236621375Mycoplasma genitalium G37, complete genome50S ribosomal protein L204e-24110
NC_002162:268049:275234275234275596363Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome50S ribosomal protein L202e-21100
NC_014965:1428902:143380714338071434160354Vibrio vulnificus MO6-24/O chromosome I, complete sequence50S ribosomal protein L20p8e-58221
NC_014972:1621850:162472816247281625081354Desulfobulbus propionicus DSM 2032 chromosome, complete genome50S ribosomal protein L20P2e-33140
NC_007613:1353500:135375413537541354086333Shigella boydii Sb227, complete genome50S ribosomal subunit protein L208e-42168
NC_014500:2589089:259289725928972593253357Dickeya dadantii 3937 chromosome, complete genome50S ribosomal subunit protein L201e-46184
NC_012026:21385:418314183142217387Anaplasma marginale str. Florida, complete genomecyanelle 50S ribosomal protein L20 (rplT)6e-23105
NC_015740:2407500:244565624456562446012357Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein6e-45179
NC_010102:1703172:170686017068601707216357Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-46182
NC_010830:718614:721569721569721913345Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-27122
NC_014004:66631:873778737787739363Candidatus Sulcia muelleri DMIN chromosome, complete genomeLSU ribosomal protein L20P1e-24111
NC_014935:31020:473024730247658357Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeLSU ribosomal protein l20p4e-29126
NC_020063:2011019:202527620252762025632357Enterobacteriaceae bacterium strain FGI 57, complete genomeLSU ribosomal protein L20P4e-46182
NC_017505:751836:757754757754758113360Neisseria meningitidis alpha710 chromosome, complete genomeputative 50S ribosomal protein L204e-39159
NC_007492:2203220:220322022032202203576357Pseudomonas fluorescens PfO-1, complete genomeRibosomal protein L202e-46183
NC_010658:1772994:179112517911251791481357Shigella boydii CDC 3083-94, complete genomeribosomal protein L204e-46182
NC_009512:3618055:363518436351843635540357Pseudomonas putida F1, complete genomeribosomal protein L206e-46182
NC_014931:4234288:425691142569114257270360Variovorax paradoxus EPS chromosome, complete genomeribosomal protein L209e-42168
NC_008609:2446246:248811424881142488467354Pelobacter propionicus DSM 2379, complete genomeribosomal protein L202e-33140
NC_010981:712843:728678728678729043366Wolbachia pipientis, complete genomeribosomal protein L205e-31132
NC_013517:1249466:126578512657851266129345Sebaldella termitidis ATCC 33386, complete genomeribosomal protein L207e-30129
NC_014364:2751662:277165627716562772015360Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeribosomal protein L203e-26116
NC_013123:78786:104255104255104593339Candidatus Sulcia muelleri SMDSEM, complete genomeribosomal protein L206e-23105
NC_012912:2216749:223596522359652236321357Dickeya zeae Ech1591, complete genomeribosomal protein L201e-46184
NC_013850:2103469:214291921429192143275357Klebsiella variicola At-22 chromosome, complete genomeribosomal protein L204e-46182
NC_007799:186000:188261188261188635375Ehrlichia chaffeensis str. Arkansas, complete genomeribosomal protein L203e-31133
NC_011296:1365998:136908113690811369443363Thermodesulfovibrio yellowstonii DSM 11347, complete genomeribosomal protein L204e-30129
NC_019978:2071435:209424220942422094595354Halobacteroides halobius DSM 5150, complete genomeribosomal protein L206e-29125
NC_011992:1505106:151842715184271518786360Acidovorax ebreus TPSY, complete genomeribosomal protein L202e-42171
NC_008781:2981868:299351329935132993872360Polaromonas naphthalenivorans CJ2, complete genomeribosomal protein L204e-40162
NC_011772:4487378:450443445044344504790357Bacillus cereus G9842, complete genomeribosomal protein L202e-34144
NC_015496:2371163:237990923799092380253345Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeribosomal protein L203e-28123
NC_014371:177536:206252206252206596345Prevotella melaninogenica ATCC 25845 chromosome chromosome II,ribosomal protein L205e-27119
NC_013715:1606396:161399116139911614407417Rothia mucilaginosa DY-18, complete genomeribosomal protein L204e-26116
NC_012583:335000:344184344184344537354Vibrio cholerae O395 chromosome chromosome II, complete sequenceribosomal protein L204e-59226
NC_013166:1841446:185842718584271858786360Kangiella koreensis DSM 16069, complete genomeribosomal protein L204e-47186
NC_012880:2425330:243013724301372430493357Dickeya dadantii Ech703, complete genomeribosomal protein L203e-46183
NC_011083:1408202:142006314200631420419357Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal protein L204e-46182
NC_013959:1723037:174376517437651744124360Sideroxydans lithotrophicus ES-1 chromosome, complete genomeribosomal protein L202e-43174
NC_014910:2585747:259186725918672592226360Alicycliphilus denitrificans BC chromosome, complete genomeribosomal protein l201e-42171
NC_007484:1229899:125101212510121251371360Nitrosococcus oceani ATCC 19707, complete genomeRibosomal protein L202e-41167
NC_007498:1666242:166909316690931669449357Pelobacter carbinolicus DSM 2380, complete genomeribosomal protein L205e-36149
NC_011979:3712845:371637137163713716724354Geobacter sp. FRC-32, complete genomeribosomal protein L208e-34142
NC_014098:2332938:233443123344312334790360Bacillus tusciae DSM 2912 chromosome, complete genomeribosomal protein L204e-32136
NC_017506:1100679:110348411034841103837354Marinobacter adhaerens HP15 chromosome, complete genomeribosomal protein L20, bacterial-type4e-43172