Pre_GI: BLASTN Hits

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Query: NC_012660:4149487 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4149487, End: 4175273, Length: 25787

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0936BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome0706BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome2e-173617BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome7e-149535BLASTN svgBLASTP svg
NC_009512:21086862108686214231433629Pseudomonas putida F1, complete genome2e-146527BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome1e-141511BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome5e-45190BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome5e-42180BLASTN svgBLASTP svg
NC_013457:979102*97910299831619215Vibrio sp. Ex25 chromosome 2, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013457:1703201*1703201172926026060Vibrio sp. Ex25 chromosome 2, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004603:22351422235142225571520574Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete5e-1487.7BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013889:1623697*1623697165176828072Thioalkalivibrio sp. K90mix chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013173:16091231609123163199222870Desulfomicrobium baculatum DSM 4028, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007677:11762511762514009922475Salinibacter ruber DSM 13855, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010717:4851000*4851000487555824559Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013526:31607531607534168125607Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019940:17273841727384175409926716Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008322:1898000*1898000192173523736Shewanella sp. MR-7, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008577:1885809*1885809190718721379Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008789:70791670791672921021295Halorhodospira halophila SL1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009512:4287605*4287605432250934905Pseudomonas putida F1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010162:78248787824878785192027043Sorangium cellulosum 'So ce 56', complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014532:1873169*1873169189841425246Halomonas elongata DSM 2581, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015947:23605922360592238231521724Burkholderia sp. JV3 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010337:565730*56573058815822429Heliobacterium modesticaldum Ice1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007954:1823085*1823085184470821624Shewanella denitrificans OS217, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007348:21151522115152216024045089Ralstonia eutropha JMP134 chromosome 2, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_003902:555699*55569958306027362Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_007086:557789*55778958514427356Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010337:19994051999405202306023656Heliobacterium modesticaldum Ice1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020908:27888522788852281909930248Octadecabacter arcticus 238, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011146:63912639128529321382Geobacter bemidjiensis Bem, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010505:33763223376322340791331592Methylobacterium radiotolerans JCM 2831, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007947:1556437*1556437158119324757Methylobacillus flagellatus KT, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010552:19645719645721578619330Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_012880:31252613125261315478529525Dickeya dadantii Ech703, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013421:30939953093995311483420840Pectobacterium wasabiae WPP163, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014762:2428721*2428721245871529995Sulfuricurvum kujiense DSM 16994 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007712:1712667*1712667173153718871Sodalis glossinidius str. 'morsitans', complete genome3e-0661.9BLASTN svgBLASTP svg