Pre_GI: BLASTN Hits

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Query: NC_012660:3744868 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3744868, End: 3771236, Length: 26369

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome02442BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome01285BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome01261BLASTN svgBLASTP svg
NC_015556:51564151564153855622916Pseudomonas fulva 12-X chromosome, complete genome01181BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome01061BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome01029BLASTN svgBLASTP svg
NC_014532:22680782268078229613528058Halomonas elongata DSM 2581, complete genome0660BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-168601BLASTN svgBLASTP svg
NC_018691:359695*35969537768217988Alcanivorax dieselolei B5 chromosome, complete genome1e-159571BLASTN svgBLASTP svg
NC_007517:28209092820909283908818180Geobacter metallireducens GS-15, complete genome3e-34155BLASTN svgBLASTP svg
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome1e-30143BLASTN svgBLASTP svg
NC_012857:55791155791157959921689Ralstonia pickettii 12D chromosome 2, complete genome7e-29137BLASTN svgBLASTP svg
NC_010678:11400011400013688322884Ralstonia pickettii 12J chromosome 2, complete sequence7e-29137BLASTN svgBLASTP svg
NC_015856:26803426803429827830245Collimonas fungivorans Ter331 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence1e-27133BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-27131BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome2e-26129BLASTN svgBLASTP svg
NC_008702:2942246*2942246296909926854Azoarcus sp. BH72, complete genome4e-24121BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome9e-22113BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome4e-21111BLASTN svgBLASTP svg
NC_003919:42587884258788428067521888Xanthomonas axonopodis pv. citri str. 306, complete genome4e-18101BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_007508:4283750*4283750431638632637Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete9e-1693.7BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_020260:2725201*2725201275882333623Cronobacter sakazakii Sp291, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_006834:78750078750081555228053Xanthomonas oryzae pv. oryzae KACC10331, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007705:75594875594878101525068Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010688:4235528*4235528426665131124Xanthomonas campestris pv. campestris, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010717:4626178*4626178465282826651Xanthomonas oryzae pv. oryzae PXO99A, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012660:5121219*5121219514562724409Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007645:34786303478630350293024301Hahella chejuensis KCTC 2396, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015379:25052332505233254669441462Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_009648:3720000*3720000374226022261Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006370:84720484720486812520922Photobacterium profundum SS9 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_005773:21771842177184220009922916Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007275:112112521125Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete3e-0661.9BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg