Pre_GI: BLASTN Hits

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Query: NC_012660:3573154 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3573154, End: 3598599, Length: 25446

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome3e-163583BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-120440BLASTN svgBLASTP svg
NC_004129:17418161741816177185030035Pseudomonas fluorescens Pf-5, complete genome2e-112414BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome6e-97363BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome2e-96361BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome5e-76293BLASTN svgBLASTP svg
NC_012660:165559*16555920054534987Pseudomonas fluorescens SBW25 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome5e-42180BLASTN svgBLASTP svg
NC_004578:35970833597083362009923017Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-34155BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome4e-27131BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-23119BLASTN svgBLASTP svg
NC_002516:27501282750128277880428677Pseudomonas aeruginosa PAO1, complete genome9e-19103BLASTN svgBLASTP svg
NC_011770:30498303049830308131431485Pseudomonas aeruginosa LESB58, complete genome9e-19103BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome9e-19103BLASTN svgBLASTP svg
NC_008463:28485682848568287992931362Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014306:24763162476316249830421989Erwinia billingiae Eb661, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015556:13043713043716194631510Pseudomonas fulva 12-X chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015663:1902344*1902344192926126918Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015663:18690001869000191219543196Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome5e-0867.9BLASTN svgBLASTP svg