Pre_GI: BLASTN Hits

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Query: NC_012660:3179980 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3179980, End: 3207949, Length: 27970

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome02466BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome7e-72280BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence3e-31145BLASTN svgBLASTP svg
NC_010002:56919685691968571687324906Delftia acidovorans SPH-1, complete genome2e-29139BLASTN svgBLASTP svg
NC_010688:32298203229820327221942400Xanthomonas campestris pv. campestris, complete genome7e-29137BLASTN svgBLASTP svg
NC_010170:47399254739925476955229628Bordetella petrii, complete genome7e-26127BLASTN svgBLASTP svg
NC_011992:12137261213726123279819073Acidovorax ebreus TPSY, complete genome4e-24121BLASTN svgBLASTP svg
NC_011770:28042182804218282883824621Pseudomonas aeruginosa LESB58, complete genome4e-24121BLASTN svgBLASTP svg
NC_015856:30597373059737308304923313Collimonas fungivorans Ter331 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_015968:21101752110175212892318749Enterobacter asburiae LF7a chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014973:4174668*4174668421021135544Geobacter sp. M18 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014168:471000*47100049425123252Segniliparus rotundus DSM 44985 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002939:30430683043068306461721550Geobacter sulfurreducens PCA, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014217:4597426*4597426462121223787Starkeya novella DSM 506 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007951:17112231711223173758426362Burkholderia xenovorans LB400 chromosome 1, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_012489:35036323503632352639622765Gemmatimonas aurantiaca T-27, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014931:1642179*1642179167070028522Variovorax paradoxus EPS chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome3e-0971.9BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome3e-0971.9BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome3e-0971.9BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0971.9BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012808:28862822886282290930323022Methylobacterium extorquens AM1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015663:3466471*3466471350514038670Enterobacter aerogenes KCTC 2190 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015566:1127595*1127595116557137977Serratia sp. AS12 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015567:1127780*1127780116575637977Serratia sp. AS9 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015424:32772923277292330051523224Aeromonas veronii B565 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014541:14146271414627144361328987Ferrimonas balearica DSM 9799 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010725:5491491*5491491552462633136Methylobacterium populi BJ001, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010505:50771625077162511633639175Methylobacterium radiotolerans JCM 2831, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008750:12533541253354128321029857Shewanella sp. W3-18-1, complete genome3e-0661.9BLASTN svgBLASTP svg