Pre_GI: BLASTN Hits

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Query: NC_012660:2431803 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2431803, End: 2449599, Length: 17797

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:44268274426827444459917773Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-94355BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-43184BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome1e-20109BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome1e-20109BLASTN svgBLASTP svg
NC_010623:19616851961685204159979915Burkholderia phymatum STM815 chromosome 2, complete sequence5e-1073.8BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome8e-0660BLASTN svgBLASTP svg