Pre_GI: BLASTN Hits

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Query: NC_012660:165559 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 165559, End: 200545, Length: 34987

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome01223BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome0737BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome0714BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome0672BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-102381BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-99371BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome2e-97365BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome2e-97365BLASTN svgBLASTP svg
NC_004129:17418161741816177185030035Pseudomonas fluorescens Pf-5, complete genome7e-48200BLASTN svgBLASTP svg
NC_012660:35731543573154359859925446Pseudomonas fluorescens SBW25 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_012721:22236412223641224859924959Burkholderia glumae BGR1 chromosome 2, complete genome2e-36163BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_011770:30498303049830308131431485Pseudomonas aeruginosa LESB58, complete genome1e-21113BLASTN svgBLASTP svg
NC_008463:28485682848568287992931362Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-21113BLASTN svgBLASTP svg
NC_002516:27501282750128277880428677Pseudomonas aeruginosa PAO1, complete genome1e-21113BLASTN svgBLASTP svg
NC_015379:29999652999965302200322039Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-21111BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-20109BLASTN svgBLASTP svg
NC_015556:13043713043716194631510Pseudomonas fulva 12-X chromosome, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_014306:24763162476316249830421989Erwinia billingiae Eb661, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_007963:35004683500468352206621599Chromohalobacter salexigens DSM 3043, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome1e-0663.9BLASTN svgBLASTP svg