Pre_GI: BLASTP Hits

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Query: NC_012660:819381:834374 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 834374, End: 835225, Length: 852

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:47504:110621110621111469849Pseudomonas poae RE*1-1-14, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-149529
NC_015733:864959:880037880037880897861Pseudomonas putida S16 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-128457
NC_009656:5475540:547789154778915478739849Pseudomonas aeruginosa PA7 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase7e-116416
NC_015410:1202370:121947012194701220342873Pseudomonas mendocina NK-01 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-107389
NC_009439:1174432:119369011936901194565876Pseudomonas mendocina ymp, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-105381
NC_015224:2095816:211785621178562118737882Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4-diphosphocytidyl-2-C-methyl-D-erythritol kinase4e-75281
NC_013421:2613137:261525226152522616112861Pectobacterium wasabiae WPP163, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase6e-75280
NC_013716:1918664:191928419192841920135852Citrobacter rodentium ICC168, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase4e-72271
NC_012214:2221702:222170222217022222565864Erwinia pyrifoliae Ep1/96, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase5e-72271
NC_014012:3812754:383343638334363834296861Shewanella violacea DSS12, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase5e-72271
NC_013961:1622616:166893016689301669793864Erwinia amylovora, complete genome4-diphosphocytidyl-2-C-methyl-D- erythritolkinase3e-71268
NC_013971:1660144:170645717064571707320864Erwinia amylovora ATCC 49946 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-71268
NC_020064:2697116:270205527020552702915861Serratia marcescens FGI94, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-71268
NC_004547:2470978:248987024898702490742873Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-71268
NC_013508:1491945:151383515138351514716882Edwardsiella tarda EIB202, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase8e-71267
NC_004631:1182883:118203511820351182886852Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-70266
NC_003198:1771432:179824617982461799097852Salmonella enterica subsp. enterica serovar Typhi str. CT18,4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-70266
NC_021066:839734:870552870552871406855Raoultella ornithinolytica B6, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-70265
NC_014121:1589389:161550516155051616374870Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4-diphosphocytidyl-2-C-methyl-D-erythritol kinase9e-70263
NC_014500:2479814:248303724830372483909873Dickeya dadantii 3937 chromosome, complete genome4-diphosphocytidyl-2-C-methylerythritol kinase1e-69263
NC_016514:2713834:271383427138342714703870Enterobacter cloacae EcWSU1 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-67255
NC_015663:3586836:360731536073153608169855Enterobacter aerogenes KCTC 2190 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase5e-67254
NC_016816:2684336:268643026864302687287858Pantoea ananatis LMG 5342, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase6e-67254
NC_015731:3658956:365970736597073660546840Nitrosomonas sp. Is79A3 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-64245
NC_010995:764567:783295783295784140846Cellvibrio japonicus Ueda107, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase9e-64243
NC_016112:3840053:388354838835483884396849Methylomicrobium alcaliphilum chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-63243
NC_012969:2136243:213977821397782140638861Methylovorus glucosetrophus SIP3-4 chromosome, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase1e-61236
NC_014733:2095996:210170821017082102568861Methylovorus sp. MP688 chromosome, complete genome4-diphosphocytidyl-2c-methyl-d-erythritol kinase1e-61236
NC_010084:534937:562893562893563774882Burkholderia multivorans ATCC 17616 chromosome 1, complete4-diphosphocytidyl-2-C-methyl-D-erythritol kinase6e-59227
NC_010804:2960352:296099929609992961880882Burkholderia multivorans ATCC 17616 chromosome 1, complete4-diphosphocytidyl-2-C-methyl-D-erythritol kinase6e-59227
NC_002929:3305682:333059533305953331494900Bordetella pertussis Tohama I, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase6e-51201
NC_017223:3345902:337081533708153371714900Bordetella pertussis CS chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase6e-51201
NC_002927:960369:960369960369961268900Bordetella bronchiseptica RB50, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase5e-51201
NC_012968:2000218:200021820002182001096879Methylotenera mobilis JLW8, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase2e-50199
NC_017512:789600:811429811429812274846Neisseria meningitidis WUE 2594, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)1e-49196
NC_003116:1018813:104053610405361041381846Neisseria meningitidis Z2491, complete genomehypothetical protein1e-49196
NC_008767:804655:824942824942825787846Neisseria meningitidis FAM18, complete genomehypothetical protein1e-49196
NC_011761:2457560:246002124600212460866846Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-49196
NC_017517:898771:919054919054919899846Neisseria meningitidis M01-240355 chromosome, complete genome4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase4e-49194
NC_004061:166375:184078184078184956879Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeisopentenyl monophosphate kinase8e-49194
NC_009465:90000:124722124722125579858Candidatus Vesicomyosocius okutanii HA, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase7e-48191
NC_015677:3520524:354388635438863544749864Ramlibacter tataouinensis TTB310 chromosome, complete genome4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase1e-46186
NC_009922:315870:337864337864338742879Alkaliphilus oremlandii OhILAs, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase6e-36151
NC_012918:1697860:170316717031671704009843Geobacter sp. M21 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-35149
NC_014973:3151701:316434331643433165185843Geobacter sp. M18 chromosome, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase5e-35148
NC_016894:3329562:333220333322033333081879Acetobacterium woodii DSM 1030 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase6e-28124
NC_019978:91483:950549505495923870Halobacteroides halobius DSM 5150, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase7e-28124
NC_016026:1969766:197171519717151972620906Micavibrio aeruginosavorus ARL-13 chromosome, complete genome4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase8e-27120
NC_010814:2758902:278231227823122783157846Geobacter lovleyi SZ, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase4e-26118
NC_013946:415028:440189440189441016828Meiothermus ruber DSM 1279 chromosome, complete genome4-diphosphocytidyl-2C-methyl-D-erythritolkinase4e-25115
NC_005071:671084:674112674112675071960Prochlorococcus marinus str. MIT 9313, complete genomePutative 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK)2e-23109
NC_008261:2743942:274610927461092746975867Clostridium perfringens ATCC 13124, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase4e-23108
NC_007516:1086948:111217411121741113097924Synechococcus sp. CC9605, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase4e-23108
NC_013939:441921:441921441921442766846Deferribacter desulfuricans SSM1, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase3e-22105
NC_006177:3457637:346058534605853461433849Symbiobacterium thermophilum IAM 14863, complete genomeputative 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase3e-22105
NC_015977:2565922:256664525666452567517873Roseburia hominis A2-183 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-22105
NC_015185:1414453:143360614336061434448843Desulfurobacterium thermolithotrophum DSM 11699 chromosome,4-diphosphocytidyl-2-C-methyl-D- erythritolkinase3e-22105
NC_004193:35698:537415374154583843Oceanobacillus iheyensis HTE831, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-21103
NC_011297:1296968:131926113192611320124864Dictyoglomus thermophilum H-6-12, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase3e-2099.4
NC_013928:174500:188013188013188861849Streptococcus mutans NN2025, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase5e-2098.2
NC_014761:1981435:198720619872061988057852Oceanithermus profundus DSM 14977 chromosome, complete genome4-diphosphocytidyl-2-c-methyl-d-erythritol kinase7e-2097.8
NC_000911:96325:101884101884102831948Synechocystis sp. PCC 6803, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase4e-1995.5
NC_017039:96325:101884101884102831948Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeisopentenyl monophosphate kinase4e-1995.5
NC_017052:96325:101884101884102831948Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeisopentenyl monophosphate kinase4e-1995.5
NC_017277:96325:101884101884102831948Synechocystis sp. PCC 6803, complete genomeisopentenyl monophosphate kinase4e-1995.5
NC_016751:1604048:162129416212941622061768Marinitoga piezophila KA3 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase3e-1789.4
NC_002937:1634287:165835716583571659217861Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete4-diphosphocytidyl-2C-methyl-D-erythritol kinase6e-1788.2
NC_010483:1441614:145677714567771457592816Thermotoga sp. RQ2, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase7e-1787.8
NC_015672:1921023:194267819426781943523846Flexistipes sinusarabici DSM 4947 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D- erythritolkinase3e-1685.9
NC_015914:2769042:277369227736922774501810Cyclobacterium marinum DSM 745 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-1584
NC_018145:147759:165760165760166608849Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-1583.2
NC_017095:2058921:206673120667312067540810Fervidobacterium pennivorans DSM 9078 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase5e-1478.6
NC_012121:139741:147402147402148172771Staphylococcus carnosus subsp. carnosus TM300, complete genomeGHMP kinase family protein1e-1377.4
NC_014363:1902868:192129819212981922254957Olsenella uli DSM 7084 chromosome, complete genome4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase1e-1377.4
NC_010376:606000:608377608377609213837Finegoldia magna ATCC 29328, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase4e-1375.5
NC_017094:828836:837820837820838614795Leptospirillum ferrooxidans C2-3, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase2e-1273.2
NC_016148:1175999:119138811913881192248861Thermovirga lienii DSM 17291 chromosome, complete genomeGHMP kinase7e-1271.2
NC_009664:1195630:122335312233531224330978Kineococcus radiotolerans SRS30216, complete genome4-diphosphocytidyl-2C-methyl-D-erythritol kinase3e-1169.3
NC_015389:1610756:162727216272721628171900Coriobacterium glomerans PW2 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-D-erythritol kinase1e-1067.4
NC_018607:2578433:259395125939512594808858Brachyspira pilosicoli B2904 chromosome, complete genome4-diphosphocytidyl-2-C-methyl-d-erythritol kinase2e-0962.8
NC_018604:233769:234401234401235258858Brachyspira pilosicoli WesB complete genomeputative 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase2e-0962.8
NC_014330:1541874:154315915431591544016858Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase6e-0961.6