Pre_GI: BLASTP Hits

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Query: NC_012660:819381:832535 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 832535, End: 833137, Length: 603

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:47504:108771108771109382612Pseudomonas poae RE*1-1-14, complete genome50S ribosomal protein L25/general stress protein Ctc3e-94343
NC_015733:864959:878238878238878831594Pseudomonas putida S16 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc3e-89327
NC_004578:1190000:121776012177601218371612Pseudomonas syringae pv. tomato str. DC3000, complete genome50S ribosomal protein L253e-84311
NC_009656:5475540:547996554799655480579615Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc1e-70265
NC_009434:3434381:343543034354303436047618Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L25/general stress protein Ctc1e-70265
NC_009439:1174432:119176011917601192365606Pseudomonas mendocina ymp, complete genome50S ribosomal protein L25/general stress protein Ctc2e-65248
NC_015410:1202370:121752812175281218142615Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc1e-58225
NC_010995:764567:781312781312781923612Cellvibrio japonicus Ueda107, complete genomeribosomal protein L25, Ctc-form6e-49193
NC_014733:2095996:210375921037592104376618Methylovorus sp. MP688 chromosome, complete genomeribosomal 5S rRNA e-loop binding protein ctc/l25/tl55e-45180
NC_012969:2136243:214182921418292142446618Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL55e-45180
NC_012968:2000218:200232320023232002931609Methylotenera mobilis JLW8, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL57e-45179
NC_016112:3840053:388179238817923882412621Methylomicrobium alcaliphilum chromosome, complete genome50S ribosomal protein L253e-42171
NC_017033:678321:679438679438680076639Frateuria aurantia DSM 6220 chromosome, complete genome50S ribosomal protein L255e-42170
NC_015572:4209000:424572442457244246338615Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L258e-41166
NC_015731:3658956:366175736617573662380624Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L252e-40164
NC_010170:4196197:422510142251014225724624Bordetella petrii, complete genome50S ribosomal protein L254e-34144
NC_010804:2960352:296317229631722963777606Burkholderia multivorans ATCC 17616 chromosome 1, completelarge subunit ribosomal protein L251e-33142
NC_010084:534937:560996560996561601606Burkholderia multivorans ATCC 17616 chromosome 1, complete50S ribosomal protein L25/general stress protein Ctc1e-33142
NC_010645:558974:560020560020560616597Bordetella avium 197N, complete genome50S ribosomal protein L25/general stress protein Ctc6e-31133
NC_002927:960369:962550962550963164615Bordetella bronchiseptica RB50, complete genome50S ribosomal protein L252e-30132
NC_002929:3305682:332869933286993329325627Bordetella pertussis Tohama I, complete genome50S ribosomal protein L253e-30131
NC_017223:3345902:336891933689193369545627Bordetella pertussis CS chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc3e-30131
NC_015573:162000:165573165573166208636Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome50S ribosomal protein L253e-27121
NC_010725:2589014:261462726146272615313687Methylobacterium populi BJ001, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-25115
NC_007643:4294818:429481842948184295450633Rhodospirillum rubrum ATCC 11170, complete genomeRibosomal protein L253e-24111
NC_010571:2943369:294772029477202948538819Opitutus terrae PB90-1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-23109
NC_014654:2180994:220285322028532203533681Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-22105
NC_010814:2758902:278068427806842781268585Geobacter lovleyi SZ, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-2099
NC_016111:2257166:226529822652982265885588Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L253e-2098.2
NC_017094:828836:839914839914840516603Leptospirillum ferrooxidans C2-3, complete genome50S ribosomal protein L257e-2097.1
NC_013947:1363078:137016713701671370784618Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL59e-2096.7
NC_012918:1697860:172822217282221728815594Geobacter sp. M21 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc5e-1994.4
NC_016629:2971860:297827829782782978901624Desulfovibrio africanus str. Walvis Bay chromosome, complete50S ribosomal protein L255e-1994.4
NC_019978:91483:103069103069103725657Halobacteroides halobius DSM 5150, complete genomeribosomal protein L25, Ctc-form5e-1994.4
NC_006177:2398482:245348424534842454101618Symbiobacterium thermophilum IAM 14863, complete genome50S ribosomal protein L251e-1892.8
NC_013171:1194500:121332512133251213978654Anaerococcus prevotii DSM 20548, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-1892.4
NC_012121:139741:152742152742153386645Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L252e-1892.4
NC_020419:1037899:104634610463461047065720Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, complete50S ribosomal protein L252e-1892.4
NS_000191:1037899:104634610463461047065720Uncultured Termite group 1 bacterium phylotype Rs-D17, complete50S ribosomal protein L252e-1892.4
NC_008710:819389:831188831188831736549Borrelia turicatae 91E135, complete genomeLSU ribosomal protein L25P3e-1891.7
NC_009664:1195630:121492912149291215558630Kineococcus radiotolerans SRS30216, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-1890.9
NC_002937:1634287:165667516566751657247573Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeribosomal protein L255e-1890.9
NC_013929:6008072:601228160122816012877597Streptomyces scabiei 87.22 chromosome, complete genome50S ribosomal protein L252e-1789
NC_009922:42696:489964899649571576Alkaliphilus oremlandii OhILAs, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-1787.4
NC_014168:471000:489658489658490287630Segniliparus rotundus DSM 44985 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-1787.4
NC_009828:469778:482203482203482853651Thermotoga lettingae TMO, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-1685.9
NC_013715:1750403:176718117671811767840660Rothia mucilaginosa DY-18, complete genomeribosomal protein L254e-1684.7
NC_011027:858565:860211860211860816606Chlorobaculum parvum NCIB 8327, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1684.7
NC_009617:1165539:117622811762281176797570Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL54e-1684.3
NC_013971:2408522:241129624112962411580285Erwinia amylovora ATCC 49946 chromosome, complete genome50S ribosomal protein L252e-1582.4
NC_013961:2370994:237376823737682374052285Erwinia amylovora, complete genome50S ribosomal protein L252e-1582.4
NC_015566:3622385:362430436243043624588285Serratia sp. AS12 chromosome, complete genome50S ribosomal protein L252e-1582.4
NC_009495:3309550:331226333122633312799537Clostridium botulinum A str. ATCC 3502 chromosome, complete genome50S ribosomal protein L252e-1582
NC_009698:3185359:318535931853593185895537Clostridium botulinum A str. Hall chromosome, complete genome50S ribosomal protein L252e-1582
NC_016816:1545354:157642915764291576713285Pantoea ananatis LMG 5342, complete genome50S ribosomal protein L257e-1580.5
NC_012658:3387774:339045033904503390986537Clostridium botulinum Ba4 str. 657 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc8e-1580.5
NC_020064:3157656:316055131605513160835285Serratia marcescens FGI94, complete genomeribosomal protein L25 (general stress protein Ctc)1e-1480.1
NC_010516:3368951:337288633728863373422537Clostridium botulinum B1 str. Okra, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-1480.1
NC_009053:553298:556776556776557063288Actinobacillus pleuropneumoniae L20, complete genome50S ribosomal protein L252e-1479
NC_020054:3501467:350632635063263506889564Fibrella aestuarina BUZ 2 drat genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-1376.3
NC_012917:1840172:188436018843601884644285Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeribosomal protein L252e-1375.5
NC_015501:868909:871186871186871821636Porphyromonas asaccharolytica DSM 20707 chromosome, complete50S ribosomal protein L252e-1375.5
NC_006511:682863:704403704403704687285Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L252e-1375.5
NC_010102:683444:719092719092719376285Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1375.5
NC_011147:682897:704349704349704633285Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L252e-1375.5
NC_016863:2324293:232617823261782326462285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L252e-1375.5
NC_016114:4333390:433740443374044337991588Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1375.1
NC_009718:643200:670458670458671117660Fervidobacterium nodosum Rt17-B1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-1374.3
NC_016012:879972:897032897032897625594Candidatus Arthromitus sp. SFB-rat-Yit, complete genome50S ribosomal protein L25/general stress protein Ctc5e-1374.3
NC_010067:660659:679844679844680128285Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1374.3
NC_014618:1593360:160859116085911608875285Enterobacter cloacae SCF1 chromosome, complete genome50S ribosomal protein L252e-1272.8
NC_004369:1051013:106982310698231070431609Corynebacterium efficiens YS-314, complete genome50S ribosomal protein L252e-1272
NC_013222:299683:370951370951371463513Robiginitalea biformata HTCC2501, complete genomeputative 50S ribosomal protein L253e-1271.6
NC_009615:363285:380854380854381438585Parabacteroides distasonis ATCC 8503 chromosome, complete genome50S ribosomal protein L255e-1270.9
NC_016893:694587:697886697886698176291Wigglesworthia glossinidia endosymbiont of Glossina morsitans50S ribosomal protein L253e-1065.1
NC_012673:77610:821268212682773648Exiguobacterium sp. AT1b, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-1064.3
NC_009922:42696:481964819648789594Alkaliphilus oremlandii OhILAs, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-0962
NC_003366:2143173:214505621450562145667612Clostridium perfringens str. 13, complete genomeprobable general stress protein4e-0961.2
NC_014218:1663486:166348616634861664067582Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL54e-0961.2
NC_014643:1577021:157897215789721579268297Rothia dentocariosa ATCC 17931 chromosome, complete genomeribosomal L25p family protein7e-0960.5
NC_009850:628024:645702645702646238537Arcobacter butzleri RM4018, complete genome50S ribosomal protein L252e-0652.4
NC_017256:144854:144854144854145138285Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,50S ribosomal protein L253e-0652