Pre_GI: BLASTP Hits

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Query: NC_012660:819381:831782 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 831782, End: 832366, Length: 585

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:47504:108018108018108602585Pseudomonas poae RE*1-1-14, complete genomepeptidyl-tRNA hydrolase3e-98357
NC_004578:1190000:121701112170111217595585Pseudomonas syringae pv. tomato str. DC3000, complete genomepeptidyl-tRNA hydrolase1e-87322
NC_015733:864959:877574877574878158585Pseudomonas putida S16 chromosome, complete genomepeptidyl-tRNA hydrolase1e-84311
NC_009656:5475540:548062154806215481205585Pseudomonas aeruginosa PA7 chromosome, complete genomepeptidyl-tRNA hydrolase9e-84309
NC_015410:1202370:121687712168771217467591Pseudomonas mendocina NK-01 chromosome, complete genomepeptidyl-tRNA hydrolase3e-80297
NC_009439:1174432:119110611911061191696591Pseudomonas mendocina ymp, complete genomepeptidyl-tRNA hydrolase3e-80297
NC_010995:764567:780594780594781337744Cellvibrio japonicus Ueda107, complete genomepeptidyl-tRNA hydrolase7e-64243
NC_015224:2095816:211502721150272115620594Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,peptidyl-tRNA hydrolase7e-53206
NC_004547:2470978:248745224874522488039588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomepeptidyl-tRNA hydrolase2e-52205
NC_014500:2479814:248792924879292488516588Dickeya dadantii 3937 chromosome, complete genomepeptidyl-tRNA hydrolase4e-52204
NC_013421:2613137:261795126179512618538588Pectobacterium wasabiae WPP163, complete genomepeptidyl-tRNA hydrolase1e-51202
NC_016816:2684336:269027726902772690864588Pantoea ananatis LMG 5342, complete genomePeptidyl-tRNA hydrolase8e-51199
NC_013508:1491945:151007915100791510669591Edwardsiella tarda EIB202, complete genomepeptidyl-tRNA hydrolase3e-50197
NC_010634:2252329:227347822734782274098621Yersinia pseudotuberculosis PB1/+, complete genomepeptidyl-tRNA hydrolase7e-50196
NC_010067:1116148:113537111353711135979609Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-49194
NC_003198:1771432:180269518026951803303609Salmonella enterica subsp. enterica serovar Typhi str. CT18,peptidyl-tRNA hydrolase3e-49194
NC_020064:2697116:270482327048232705398576Serratia marcescens FGI94, complete genomepeptidyl-tRNA hydrolase1e-48192
NC_015663:3586836:360319736031973603781585Enterobacter aerogenes KCTC 2190 chromosome, complete genomepeptidyl-tRNA hydrolase2e-48192
NC_021066:839734:865200865200865784585Raoultella ornithinolytica B6, complete genomepeptidyl-tRNA hydrolase4e-48191
NC_011283:2103500:212736321273632127947585Klebsiella pneumoniae 342 chromosome, complete genomepeptidyl-tRNA hydrolase3e-48191
NC_013716:1918664:192402619240261924610585Citrobacter rodentium ICC168, complete genomePeptidyl-tRNA hydrolase3e-48191
NC_014618:2139639:215654921565492157133585Enterobacter cloacae SCF1 chromosome, complete genomepeptidyl-tRNA hydrolase2e-48191
NC_016514:2713834:271930027193002719884585Enterobacter cloacae EcWSU1 chromosome, complete genomepeptidyl-tRNA hydrolase2e-47188
NC_013961:1622616:166626916662691666856588Erwinia amylovora, complete genomePeptidyl-tRNA hydrolase4e-47187
NC_013971:1660144:170379617037961704383588Erwinia amylovora ATCC 49946 chromosome, complete genomepeptidyl-tRNA hydrolase4e-47187
NC_012214:2221702:222464022246402225227588Erwinia pyrifoliae Ep1/96, complete genomepeptidyl-tRNA hydrolase4e-47187
NC_014121:1589389:161032416103241610908585Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepeptidyl-tRNA hydrolase3e-47187
NC_009434:3434381:343628534362853436665381Pseudomonas stutzeri A1501, complete genomepeptidyl-tRNA hydrolase2e-46185
NC_012969:2136243:214255721425572143144588Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidyl-tRNA hydrolase8e-45179
NC_014733:2095996:210448721044872105074588Methylovorus sp. MP688 chromosome, complete genomepeptidyl-tRNA hydrolase8e-45179
NC_010804:2960352:296388629638862964485600Burkholderia multivorans ATCC 17616 chromosome 1, completePTH1 family peptidyl-tRNA hydrolase1e-42172
NC_010084:534937:560288560288560887600Burkholderia multivorans ATCC 17616 chromosome 1, completepeptidyl-tRNA hydrolase1e-42172
NC_014323:4792048:479462347946234795201579Herbaspirillum seropedicae SmR1 chromosome, complete genomepeptidyl-tRNA hydrolase3e-42171
NC_017223:3345902:336819433681943368790597Bordetella pertussis CS chromosome, complete genomepeptidyl-tRNA hydrolase3e-39161
NC_002929:3305682:332797433279743328570597Bordetella pertussis Tohama I, complete genomepeptidyl-tRNA hydrolase3e-39161
NC_012968:2000218:200305420030542003629576Methylotenera mobilis JLW8, complete genomepeptidyl-tRNA hydrolase4e-39160
NC_002927:960369:963242963242963889648Bordetella bronchiseptica RB50, complete genomepeptidyl-tRNA hydrolase8e-39159
NC_010170:4196197:422441042244104225042633Bordetella petrii, complete genomepth2e-38158
NC_015731:3658956:366250236625023663071570Nitrosomonas sp. Is79A3 chromosome, complete genomepeptidyl-tRNA hydrolase2e-38158
NC_010645:558974:560665560665561288624Bordetella avium 197N, complete genomepeptidyl-tRNA hydrolase2e-38158
NC_017033:678321:680121680121680702582Frateuria aurantia DSM 6220 chromosome, complete genomepeptidyl-tRNA hydrolase1e-36152
NC_015572:4209000:424513342451334245711579Methylomonas methanica MC09 chromosome, complete genomepeptidyl-tRNA hydrolase1e-28125
NC_010814:2758902:278003927800392780620582Geobacter lovleyi SZ, complete genomeAminoacyl-tRNA hydrolase1e-26119
NC_007643:4294818:429547842954784296209732Rhodospirillum rubrum ATCC 11170, complete genomeAminoacyl-tRNA hydrolase1e-25115
NC_015573:162000:178375178375178947573Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomepeptidyl-tRNA hydrolase2e-23108
NC_012918:1697860:172882817288281729394567Geobacter sp. M21 chromosome, complete genomepeptidyl-tRNA hydrolase2e-23108
NC_000911:2777447:279742227974222798006585Synechocystis sp. PCC 6803, complete genomepeptidyl-tRNA hydrolase2e-23108
NC_017039:2775275:279525027952502795834585Synechocystis sp. PCC 6803 substr. PCC-P, complete genomepeptidyl-tRNA hydrolase2e-23108
NC_017052:2775263:279523827952382795822585Synechocystis sp. PCC 6803 substr. PCC-N, complete genomepeptidyl-tRNA hydrolase2e-23108
NC_017277:2776264:279623927962392796823585Synechocystis sp. PCC 6803, complete genomepeptidyl-tRNA hydrolase2e-23108
NC_002937:1634287:165595516559551656560606Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completepeptidyl-tRNA hydrolase2e-23108
NC_014314:576465:617101617101617667567Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completepeptidyl-tRNA hydrolase3e-22104
NC_019978:91483:103810103810104367558Halobacteroides halobius DSM 5150, complete genomepeptidyl-tRNA hydrolase3e-22104
NC_013715:1750403:176644717664471767034588Rothia mucilaginosa DY-18, complete genomepeptidyl-tRNA hydrolase7e-22103
NC_014624:3538094:354157735415773542188612Eubacterium limosum KIST612 chromosome, complete genomepeptidyl-tRNA hydrolase6e-22103
NC_014643:1577021:157955615795561580140585Rothia dentocariosa ATCC 17931 chromosome, complete genomeaminoacyl-tRNA hydrolase1e-21102
NC_013939:441921:443746443746444324579Deferribacter desulfuricans SSM1, complete genomepeptidyl-tRNA hydrolase PTH1 family8e-21100
NC_015672:1921023:194111919411191941709591Flexistipes sinusarabici DSM 4947 chromosome, complete genomepeptidyl-tRNA hydrolase1e-2099.8
NC_013947:1363078:137079013707901371431642Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidyl-tRNA hydrolase1e-2099.4
NC_013517:104480:105127105127105699573Sebaldella termitidis ATCC 33386, complete genomepeptidyl-tRNA hydrolase1e-2099.4
NC_014632:11925:171811718117750570Ilyobacter polytropus DSM 2926 chromosome, complete genomepeptidyl-tRNA hydrolase1e-2099.4
NC_014654:2180994:220223222022322202789558Halanaerobium sp. 'sapolanicus' chromosome, complete genomepeptidyl-tRNA hydrolase2e-2099
NC_006448:5046:448444845053570Streptococcus thermophilus LMG 18311, complete genomepeptidyl-tRNA hydrolase3e-2098.2
NC_006449:5046:448444845053570Streptococcus thermophilus CNRZ1066, complete genomepeptidyl-tRNA hydrolase3e-2098.2
NC_015389:2030154:203514620351462035784639Coriobacterium glomerans PW2 chromosome, complete genomepeptidyl-tRNA hydrolase4e-2097.8
NC_009922:2850320:287045028704502871007558Alkaliphilus oremlandii OhILAs, complete genomeAminoacyl-tRNA hydrolase1e-1995.9
NC_014168:471000:490320490320490880561Segniliparus rotundus DSM 44985 chromosome, complete genomepeptidyl-tRNA hydrolase1e-1995.9
NC_010725:2589014:261389126138912614523633Methylobacterium populi BJ001, complete genomeAminoacyl-tRNA hydrolase3e-1994.7
NC_014483:39729:411494114941709561Paenibacillus polymyxa E681 chromosome, complete genomePeptidyl-tRNA hydrolase (PTH)4e-1994.4
NC_016641:1639356:163963216396321640192561Paenibacillus terrae HPL-003 chromosome, complete genomepeptidyl-tRNA hydrolase1e-1893.2
NC_009633:168266:174900174900175457558Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidyl-tRNA hydrolase1e-1892.8
NC_010516:3845942:385718138571813857750570Clostridium botulinum B1 str. Okra, complete genomepeptidyl-tRNA hydrolase2e-1892
NC_009697:3753527:376203337620333762602570Clostridium botulinum A str. ATCC 19397 chromosome, completepeptidyl-tRNA hydrolase2e-1892
NC_009698:3647955:365914336591433659712570Clostridium botulinum A str. Hall chromosome, complete genomepeptidyl-tRNA hydrolase2e-1892
NC_011999:2023248:204820520482052048774570Macrococcus caseolyticus JCSC5402, complete genomepeptidyl-tRNA hydrolase3e-1891.7
NC_009850:628024:646247646247646798552Arcobacter butzleri RM4018, complete genomepeptidyl-tRNA hydrolase3e-1891.7
NC_009664:1195630:121430612143061214902597Kineococcus radiotolerans SRS30216, complete genomeAminoacyl-tRNA hydrolase3e-1891.3
NC_017297:3878540:388704638870463887615570Clostridium botulinum F str. 230613 chromosome, complete genomeaminoacyl-tRNA hydrolase9e-1890.1
NC_004369:1051013:106547110654711066166696Corynebacterium efficiens YS-314, complete genomepeptidyl-tRNA hydrolase1e-1789.4
NS_000191:1037899:104571410457141046298585Uncultured Termite group 1 bacterium phylotype Rs-D17, completepeptidyl-tRNA hydrolase4e-1787.8
NC_020419:1037899:104571410457141046298585Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completepeptidyl-tRNA hydrolase4e-1787.8
NC_014614:554949:554949554949555509561Clostridium sticklandii, complete genomepeptidyl-tRNA hydrolase4e-1787.8
NC_016629:2971860:297751729775172978140624Desulfovibrio africanus str. Walvis Bay chromosome, completePeptidyl-tRNA hydrolase1e-1686.7
NC_015846:24771:383043830438870567Capnocytophaga canimorsus Cc5 chromosome, complete genomepeptidyl-tRNA hydrolase1e-1685.9
NC_013222:299683:371635371635372201567Robiginitalea biformata HTCC2501, complete genomepeptidyl-tRNA hydrolase2e-1685.9
NC_009828:469778:482850482850483413564Thermotoga lettingae TMO, complete genomeAminoacyl-tRNA hydrolase4e-1684.7
NC_016111:2257166:226463322646332265220588Streptomyces cattleya NRRL 8057, complete genomePeptidyl-tRNA hydrolase6e-1684
NC_015725:926824:945102945102945668567Mycoplasma bovis Hubei-1 chromosome, complete genomepeptidyl-tRNA hydrolase5e-1684
NC_010571:2943369:294859929485992949183585Opitutus terrae PB90-1, complete genomeAminoacyl-tRNA hydrolase7e-1683.6
NC_017094:828836:840528840528841094567Leptospirillum ferrooxidans C2-3, complete genomepeptidyl-tRNA hydrolase1e-1583.2
NC_016114:4333390:433669943366994337292594Streptomyces flavogriseus ATCC 33331 chromosome, complete genomepeptidyl-tRNA hydrolase2e-1582.4
NC_014774:605085:626795626795627385591Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completepeptidyl-tRNA hydrolase3e-1581.3
NC_008710:819389:831743831743832309567Borrelia turicatae 91E135, complete genomepeptidyl-tRNA hydrolase1e-1479.7
NC_009718:643200:669823669823670365543Fervidobacterium nodosum Rt17-B1, complete genomepeptidyl-tRNA hydrolase1e-1479.7
NC_012121:139741:153873153873154445573Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein1e-1479.7
NC_013929:6008072:601160660116066012208603Streptomyces scabiei 87.22 chromosome, complete genomeaminoacyl-tRNA hydrolase6e-1477
NC_015501:556994:563753563753564313561Porphyromonas asaccharolytica DSM 20707 chromosome, completePeptidyl-tRNA hydrolase8e-1477
NC_009615:363285:380205380205380768564Parabacteroides distasonis ATCC 8503 chromosome, complete genomepeptidyl-tRNA hydrolase1e-1376.3
NC_004369:1051013:106914710691471069680534Corynebacterium efficiens YS-314, complete genomepeptidyl-tRNA hydrolase3e-1375.1