Pre_GI: BLASTP Hits

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Query: NC_012660:819381:821326 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 821326, End: 822114, Length: 789

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EpaR1e-1687
NC_011741:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR1e-1687
AP010958:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EpaR1e-1687
CU928160:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR1e-1687
NC_013361:3867558:388985638898563890623768Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein EpaR7e-1684.3
NC_013364:3552284:357458735745873575354768Escherichia coli O111:H- str. 11128, complete genometype III secretion protein EpaR7e-1684.3
NC_011748:3196173:321850832185083219275768Escherichia coli 55989, complete genomeputative Type III secretion protein EpaR1e-1584
CU928145:3196173:321850832185083219275768Escherichia coli 55989 chromosome, complete genomeputative Type III secretion protein EpaR1e-1584
NC_011751:3285646:330819233081923308959768Escherichia coli UMN026 chromosome, complete genomeputative type III secretion protein EpaR1e-1584
CP002516:903241:913892913892914659768Escherichia coli KO11, complete genometype III secretion protein SpaR/YscT/HrcT9e-1684
CP002185:3167738:319141731914173192184768Escherichia coli W, complete genometype III secretion system protein9e-1684
NC_011415:3217796:324009432400943240861768Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein9e-1684
NC_016902:903241:913892913892914659768Escherichia coli KO11FL chromosome, complete genometype III secretion protein SpaR/YscT/HrcT9e-1684
NC_009800:2995958:302064530206453021412768Escherichia coli HS, complete genometype III secretion apparatus protein EpaR9e-1684
NC_010468:906957:917613917613918380768Escherichia coli ATCC 8739, complete genometype III secretion protein SpaR/YscT/HrcT9e-1684
NC_009801:3175714:319800931980093198776768Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaR1e-1583.6
NC_007645:3343815:335798933579893358774786Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscT1e-1377
NC_008011:663958:669154669154669969816Lawsonia intracellularis PHE/MN1-00, complete genomeType III secretion component protein SctT1e-1376.6
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein2e-1065.9
NC_012962:1189021:119456611945661195354789Photorhabdus asymbiotica, complete genometype iii secretion component protein sctt5e-0961.6
NC_017249:8283701:828370182837018284522822Bradyrhizobium japonicum USDA 6, complete genomeRhcT protein5e-0961.6
NC_002678:5139557:516137151613715162189819Mesorhizobium loti MAFF303099, complete genometranslocation protein in type III secretion system, hrcT2e-0859.7
NC_005126:4423964:443916744391674439955789Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctT3e-0858.9
NC_009997:2699644:270205427020542702854801Shewanella baltica OS195, complete genometype III secretion protein SpaR/YscT/HrcT1e-0653.9
NC_016901:2661971:266197126619712662771801Shewanella baltica OS678 chromosome, complete genometype III secretion protein SpaR/YscT/HrcT1e-0653.9
NC_011601:4096427:413005341300534130829777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscT5e-0651.6
NC_002655:4653160:468527046852704686046777Escherichia coli O157:H7 EDL933, complete genomeescT5e-0651.6
NC_002695:4584177:461628746162874617063777Escherichia coli O157:H7 str. Sakai, complete genomeEscT5e-0651.6
NC_011353:4688000:471939147193914720167777Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus protein SpaR/YscT/HrcT5e-0651.6
NC_013008:4643825:467543246754324676208777Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor5e-0651.6
NC_013364:3701895:374769437476943748470777Escherichia coli O111:H- str. 11128, complete genomeputative T3SS structure protein EscT5e-0651.6
NC_013941:4470932:450379145037914504567777Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeescT5e-0651.6
AP010958:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscT5e-0651.6
NC_013353:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscT5e-0651.6
NC_013361:5319497:533690553369055337681777Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscT5e-0651.6
NC_020418:14965:275152751528276762Morganella morganii subsp. morganii KT, complete genomeType III secretion inner membrane protein9e-0650.8