Pre_GI: BLASTP Hits

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Query: NC_012660:819381:821052 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 821052, End: 821315, Length: 264

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:3343815:335881133588113359080270Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscS8e-0752.4
NC_009997:2699644:270178227017822702051270Shewanella baltica OS195, complete genometype III secretion protein, HrpO family1e-0652
NC_005126:4423964:443890444389044439170267Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctS6e-0649.7
NC_002655:4653160:468604646860464686315270Escherichia coli O157:H7 EDL933, complete genomeescS8e-0649.3
NC_011601:4096427:413082941308294131098270Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscS8e-0649.3
NC_013008:4643825:467620846762084676477270Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor8e-0649.3
NC_013364:3701895:374847037484703748739270Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscS8e-0649.3
AP010958:3669500:370697637069763707245270Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscS7e-0649.3
NC_013353:3669500:370697637069763707245270Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscS7e-0649.3
NC_013361:5319497:533663653366365336905270Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscS7e-0649.3
NC_013941:4470932:450456745045674504839273Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEscS7e-0649.3
NC_002695:4584177:461706346170634617332270Escherichia coli O157:H7 str. Sakai, complete genomeEscS8e-0649.3