Pre_GI: BLASTP Hits

Some Help

Query: NC_012660:5571500:5589936 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5589936, End: 5590346, Length: 411

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5373886:545217354521735452583411Pseudomonas fluorescens Pf-5, complete genomeresponse regulator2e-24111
NC_017249:1476500:148688714868871487303417Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0960.8
NC_016626:1669477:1672272167227216739901719Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative sensor histidine kinase/response regulator3e-0960.5
NC_010322:3315024:334099633409963341412417Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein3e-0960.5
NC_011757:4293000:4334529433452943362501722Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase8e-0959.3
NC_011894:6708970:6710443671044367124251983Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase7e-0959.3
NC_011757:4293000:429384442938444294233390Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein6e-0959.3
NC_010172:4185904:419029441902944190683390Methylobacterium extorquens PA1, complete genomeresponse regulator receiver6e-0959.3
NC_012988:4633930:463700246370024637391390Methylobacterium extorquens DM4, complete genomeresponse regulator6e-0959.3
NC_012808:4235567:423864042386404239029390Methylobacterium extorquens AM1, complete genomeputative response regulator; (CheY-like protein)9e-0958.9
NC_010322:3315024:334008633400863340448363Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein1e-0858.9
NC_017249:7917586:7926765792676579284471683Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator3e-0857.4
NC_010172:3712000:372749337274933727873381Methylobacterium extorquens PA1, complete genomeresponse regulator receiver3e-0857.4
NC_020453:1785473:179139217913921791775384Agromonas oligotrophica S58 DNA, complete genomeresponse regulator receiver domain-containing protein3e-0857.4
NC_014721:508000:5241685241685253551188Caldicellulosiruptor kristjanssonii 177R1B chromosome, completesignal transduction protein4e-0857
NC_007761:3047321:305125730512573051790534Rhizobium etli CFN 42, complete genomeprobable two-component response regulator protein4e-0856.6
NC_009485:7021228:704724970472497047653405Bradyrhizobium sp. BTAi1 chromosome, complete genometwo-component response regulator5e-0856.6
NC_004463:2344128:2353736235373623554181683Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator6e-0856.2
NC_010172:798923:8172928172928189051614Methylobacterium extorquens PA1, complete genomeATP-binding region ATPase domain protein1e-0755.5
NC_010511:7024412:705057470505747050954381Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein1e-0755.5
NC_014924:2399524:2397876239787623995371662Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomehistidine kinase1e-0755.5
NC_010725:4035397:4040090404009040425132424Methylobacterium populi BJ001, complete genomemulti-sensor hybrid histidine kinase2e-0754.3
NC_020209:2838582:2838582283858228424063825Pseudomonas poae RE*1-1-14, complete genomesensor histidine kinase2e-0754.3
NC_012988:4075429:4091338409133840933351998Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS and response regulator receiver domains3e-0753.9
NC_010505:3376322:3394677339467733967672091Methylobacterium radiotolerans JCM 2831, complete genomePAS/PAC sensor hybrid histidine kinase4e-0753.5
NC_013223:1349000:1352416135241613546922277Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase6e-0753.1
NC_009445:1453132:145313214531321453536405Bradyrhizobium sp. ORS 278 chromosome, complete genometwo-component response regulator5e-0753.1
NC_011757:3486283:3521250352125035240782829Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase8e-0752.4
NC_012988:4075429:409341640934164093715300Methylobacterium extorquens DM4, complete genome1e-0652
NC_016745:2913712:2913712291371229150401329Oceanimonas sp. GK1 chromosome, complete genomeFis family transcriptional regulator1e-0652
NC_007645:3756654:377475337747533775484732Hahella chejuensis KCTC 2396, complete genomeFOG: CheY-like receiver1e-0652
NC_003919:3812778:385602138560213856389369Xanthomonas axonopodis pv. citri str. 306, complete genomesingle-domain response regulator1e-0652
NC_010172:3712000:3725376372537637274122037Methylobacterium extorquens PA1, complete genomePAS sensor protein1e-0652
NC_014640:4532095:453331345333134533702390Achromobacter xylosoxidans A8 chromosome, complete genomeresponse regulator 121e-0651.6
NC_011757:39881:6236162361648742514Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase1e-0651.6
NC_012808:3711806:3728812372881237304761665Methylobacterium extorquens AM1, complete genome1e-0651.6
NC_010505:5525461:5540340554034055425082169Methylobacterium radiotolerans JCM 2831, complete genomeintegral membrane sensor hybrid histidine kinase2e-0651.2
NC_011146:482440:5050885050885079552868Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase2e-0651.2
NC_010511:3160123:3164569316456931677423174Methylobacterium sp. 4-46 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase2e-0651.2
NC_013222:1659619:1659619165961916609441326Robiginitalea biformata HTCC2501, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family protein2e-0651.2
NC_013892:202778:2027782027782042081431Xenorhabdus bovienii SS-2004 chromosome, complete genomeresponse regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family)2e-0651.2
NC_012988:1817000:1843203184320318447081506Methylobacterium extorquens DM4, complete genomehybrid histidine kinase3e-0650.8
NC_009512:2238437:226216822621682262518351Pseudomonas putida F1, complete genomeresponse regulator receiver protein3e-0650.8
NC_020453:1785473:1792687179268717938231137Agromonas oligotrophica S58 DNA, complete genomesignal transduction histidine kinase3e-0650.4
NC_012108:4387331:4402270440227044053743105Desulfobacterium autotrophicum HRM2, complete genometwo domain fusion protein (N:Methyl-accepting chemotaxis protein-C:sensory box histidine kinase/response regulator)4e-0650.4
NC_011071:1178423:1178423117842311804922070Stenotrophomonas maltophilia R551-3, complete genomePAS/PAC sensor hybrid histidine kinase5e-0650.1
NC_015740:3678342:371320437132043713704501Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein6e-0649.7
NC_011894:3623500:3624775362477536267631989Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase6e-0649.3
NC_020209:1903830:191001719100171910394378Pseudomonas poae RE*1-1-14, complete genomeresponse regulator7e-0649.3
NC_013223:1090397:1110149111014911125602412Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase7e-0649.3
NC_011296:1086223:1086223108622310875631341Thermodesulfovibrio yellowstonii DSM 11347, complete genomeacetoacetate metabolism regulatory protein AtoC9e-0648.9