Pre_GI: BLASTP Hits

Some Help

Query: NC_012660:5571500:5575941 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5575941, End: 5576990, Length: 1050

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:5214709:5220664522066452217131050Pseudomonas fluorescens PfO-1, complete genomeQueuosine biosynthesis protein0664
NC_004129:5723787:5727234572723457282981065Pseudomonas fluorescens Pf-5, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase0655
NC_016830:1182765:1203430120343012044791050Pseudomonas fluorescens F113 chromosome, complete genomeprotein QueA0645
NC_015379:1151143:1173813117381311748621050Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,S-adenosylmethionine:tRNA ribosyltransferase-isomerase0644
NC_010501:4787963:4789473478947347905221050Pseudomonas putida W619, complete genomeS-adenosylmethionine--tRNA-ribosyltransferase- isomerase0640
NC_020829:4246847:4250280425028042513231044Pseudomonas denitrificans ATCC 13867, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase3e-180630
NC_010939:896500:9168719168719179561086Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeS-adenosylmethionine:tRNA ribosyltransferase- isomerase9e-133473
NC_015581:1133775:1138576113857611396071032Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase4e-119427
NC_018697:1343756:1348089134808913491171029Cycloclasticus sp. P1 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-114413
NC_007484:1823751:1840664184066418416981035Nitrosococcus oceani ATCC 19707, complete genomeQueuosine biosynthesis protein1e-112406
NC_014311:804157:8041578041578052091053Ralstonia solanacearum PSI07 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase8e-105380
NC_007508:3034718:3052881305288130539511071Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase3e-104378
NC_013889:1382705:1383810138381013848771068Thioalkalivibrio sp. K90mix chromosome, complete genomeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase4e-104378
NC_017271:2789667:2809160280916028102301071Xanthomonas campestris pv. raphani 756C chromosome, completeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-103376
NC_007614:2764848:2768362276836227694321071Nitrosospira multiformis ATCC 25196 chromosome 1, completeS-adenosylmethionine2e-103375
NC_014328:3682000:3693325369332536943591035Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase9e-89327
NC_011898:598014:6168716168716178931023Clostridium cellulolyticum H10, complete genomeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase1e-88326
NC_020299:127480:1309621309621320261065Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeS-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-87323
NC_011729:1600056:1612731161273116138311101Cyanothece sp. PCC 7424 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase2e-87322
NC_014376:869749:8811958811958822441050Clostridium saccharolyticum WM1 chromosome, complete genomeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase2e-87322
NC_019815:761480:7626167626167636771062Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiS-adenosylmethionine:tRNA ribosyltransferase-isomerase6e-85314
NC_015318:1336282:1371040137104013720711032Hippea maritima DSM 10411 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase2e-84312
NC_015391:695350:7115747115747126111038Carnobacterium sp. 17-4 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-83310
NC_014377:1335963:1335963133596313369881026Thermosediminibacter oceani DSM 16646 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-83308
NC_015433:791364:7964507964507974781029Streptococcus suis ST3 chromosome, complete genomeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase6e-83307
NC_015291:665714:6867616867616878011041Streptococcus oralis Uo5, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-80300
NC_009454:1042592:1061750106175010627751026Pelotomaculum thermopropionicum SI, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase2e-80299
NC_015578:2428500:2444260244426024452821023Treponema primitia ZAS-2 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase2e-80299
NC_016751:469289:4701834701834712171035Marinitoga piezophila KA3 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-78293
NC_015732:1507473:1517318151731815183371020Spirochaeta caldaria DSM 7334 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase2e-78293
NC_015144:2053969:2058295205829520593501056Weeksella virosa DSM 16922 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase5e-76284
NC_016629:1175828:1193182119318211942731092Desulfovibrio africanus str. Walvis Bay chromosome, completeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-75283
NC_013517:2607043:2610527261052726115461020Sebaldella termitidis ATCC 33386, complete genomeS-adenosylmethionine/tRNA-ribosyltransferase-iso merase1e-75283
NC_014314:576465:5812535812535822841032Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase4e-74278
NC_010172:3413392:3414945341494534160511107Methylobacterium extorquens PA1, complete genomeS-adenosylmethionine--tRNA-ribosyltransferase- isomerase9e-74277
NC_011027:1570955:1573868157386815748901023Chlorobaculum parvum NCIB 8327, complete genomeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase2e-73276
NC_020195:285606:2910852910852921281044Blattabacterium sp. (Blatta orientalis) str. Tarazona, completeQueuosine biosynthesis protein1e-71270
NC_014330:1784515:1807807180780718088831077Brachyspira pilosicoli 95/1000 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase4e-71268
NC_014934:2482934:2505820250582025068691050Cellulophaga algicola DSM 14237 chromosome, complete genomes-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-70266
NC_012730:293634:2968272968272979241098Rickettsia peacockii str. Rustic, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase2e-70266
NC_015866:274550:2929332929332940301098Rickettsia heilongjiangensis 054 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase5e-70265
NC_006142:243899:2612102612102623371128Rickettsia typhi str. Wilmington, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase3e-70265
NC_017062:244330:2616412616412627681128Rickettsia typhi str. B9991CWPP chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase3e-70265
NC_017066:243913:2612242612242623511128Rickettsia typhi str. TH1527 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase3e-70265
NC_017043:990395:1008836100883610099331098Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase6e-70264
NC_016913:859931:8763068763068774031098Rickettsia rickettsii str. Brazil chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase9e-70264
NC_007516:1810834:1827727182772718288271101Synechococcus sp. CC9605, complete genomequeuosine biosynthesis protein2e-69263
NC_016931:269537:2844392844392855361098Rickettsia massiliae str. AZT80 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase2e-69263
NC_016639:274157:2924622924622935591098Rickettsia slovaca 13-B chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-69263
NC_017065:274165:2924702924702935671098Rickettsia slovaca str. D-CWPP chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-69263
NC_017044:278500:2917572917572928541098Rickettsia parkeri str. Portsmouth chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-69263
NC_012633:276500:2897242897242908211098Rickettsia africae ESF-5, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase6e-69261
NC_009882:278384:2916232916232927201098Rickettsia rickettsii str. 'Sheila Smith', complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase4e-69261
NC_010263:278463:2917022917022927991098Rickettsia rickettsii str. Iowa, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase4e-69261
NC_016908:278457:2916942916942927911098Rickettsia rickettsii str. Colombia chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-69261
NC_016909:278327:2915672915672926641098Rickettsia rickettsii str. Arizona chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-69261
NC_016911:278415:2916552916552927521098Rickettsia rickettsii str. Hauke chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-69261
NC_016914:278500:2917882917882928851098Rickettsia rickettsii str. Hino chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-69261
NC_016915:278000:2913402913402924371098Rickettsia rickettsii str. Hlp#2 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-69261
NC_014738:469945:4910984910984921471050Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,s-adenosylmethionine--tRNA ribosyltransferase-isomerase2e-68259
NC_011769:2542000:2545433254543325466861254Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeS-adenosylmethionine/tRNA-ribosyltransferase- isomerase2e-68259
NC_006156:17637:1990519905209451041Borrelia garinii PBi chromosome linear, complete sequenceS-adenosylmethionine: tRNA ribosyltransferase-isomerase9e-67254
NC_017058:1152361:1155628115562811567431116Rickettsia australis str. Cutlack chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase5e-66251
NC_009879:260000:2747332747332758931161Rickettsia canadensis str. McKiel, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-65250
NC_016929:258500:2744082744082755681161Rickettsia canadensis str. CA410 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase1e-65249
NC_008319:571821:5910975910975922061110Synechococcus sp. CC9311, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase(Queuosine biosynthesis protein queA)1e-64247
NC_009881:283500:2937182937182948331116Rickettsia akari str. Hartford, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-64246
NC_010424:697187:7182287182287192471020Candidatus Desulforudis audaxviator MP104C, complete genomeQueuosine biosynthesis protein9e-64244
NC_014933:979063:1002008100200810030661059Bacteroides helcogenes P 36-108 chromosome, complete genomeS-adenosylmethionine/ tRNA-ribosyltransferase-isomerase7e-63241
NC_015164:3793999:3796317379631737975371221Bacteroides salanitronis DSM 18170 chromosome, complete genomeS-adenosylmethionine:tRNA ribosyltransferase-isomerase4e-57221
NC_014033:896120:8968068968068980231218Prevotella ruminicola 23 chromosome, complete genomeputative S-adenosylmethionine:tRNA ribosyltransferase-isomerase1e-56220
NC_009615:4563831:4581008458100845822221215Parabacteroides distasonis ATCC 8503 chromosome, complete genomeS-adenosylmethionine--tRNA ribosyltransferase-isomerase4e-55215
NC_013730:1342500:1343784134378413450131230Spirosoma linguale DSM 74, complete genomeQueuosine biosynthesis protein6e-54211
NC_020054:6259733:6275372627537262765681197Fibrella aestuarina BUZ 2 drat genomeQueuosine biosynthesis protein3e-51202
NC_011094:1584038:1592322159232215934011080Salmonella enterica subsp. enterica serovar Schwarzengrund strisomerase2e-36153
NC_017046:1574057:1581611158161115826901080Salmonella enterica subsp. enterica serovar Typhimurium str. 798isomerase2e-34147
NC_003197:1611302:1624874162487416259531080Salmonella typhimurium LT2, complete genomeputative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase2e-34147
NC_016810:1576636:1581727158172715828061080Salmonella enterica subsp. enterica serovar Typhimurium strputative isomerase2e-34147
NC_016856:1621279:1634851163485116359301080Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase2e-34147
NC_016857:1576636:1581727158172715828061080Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase2e-34147
NC_016860:1614280:1622564162256416236431080Salmonella enterica subsp. enterica serovar Typhimurium strputative S-adenosylmethionine:tRNA- ribosyltransferase-isomerase2e-34147
NC_016863:1575488:1583042158304215841211080Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase2e-34147
NC_011149:1578451:1589482158948215905611080Salmonella enterica subsp. enterica serovar Agona str. SL483,putative isomerase2e-34146
NC_003198:1463253:1469419146941914704981080Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative isomerase2e-34146
NC_015761:1488807:1502362150236215034411080Salmonella bongori NCTC 12419, complete genomeisomerase4e-34145