Pre_GI: BLASTP Hits

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Query: NC_012660:5571500:5574820 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5574820, End: 5575944, Length: 1125

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005956:1111500:1116640111664011177581119Bartonella henselae str. Houston-1, complete genomequeuine tRNA-ribosyltransferase6e-104377
NC_010161:1501758:1524077152407715251951119Bartonella tribocorum CIP 105476, complete genomequeuine tRNA-ribosyltransferase1e-101370
NC_014656:1536540:1538993153899315403061314Bifidobacterium longum subsp. longum BBMN68 chromosome, completetgt1e-67257
NC_011728:832073:8508818508818520081128Borrelia burgdorferi ZS7, complete genomequeuine tRNA-ribosyltransferase8e-71267
NC_011244:863306:8789678789678800941128Borrelia recurrentis A1, complete genomequeuine tRNA-ribosyltransferase2e-83309
NC_016795:1441024:145467214546721455280609Brucella abortus A13334 chromosome 1, complete sequencequeuine tRNA-ribosyltransferase3e-48192
NC_010742:955104:961245961245961754510Brucella abortus S19 chromosome 1, complete sequenceQueuine tRNA-ribosyltransferase8e-41167
NC_010103:936250:942295942295942903609Brucella canis ATCC 23365 chromosome I, complete sequencetRNA-guanine transglycosylase3e-48192
NC_016778:96792:110441110441111049609Brucella canis HSK A52141 chromosome 1, complete sequencequeuine tRNA-ribosyltransferase3e-48192
NC_003317:1030220:104387110438711044479609Brucella melitensis 16M chromosome I, complete sequenceQUEUINE TRNA-RIBOSYLTRANSFERASE3e-48192
NC_012441:956609:962639962639963247609Brucella melitensis ATCC 23457 chromosome I, complete sequencequeuine tRNA-ribosyltransferase3e-48192
NC_007618:955000:959967959967960575609Brucella melitensis biovar Abortus 2308 chromosome I, complete3e-48192
NC_017244:956554:962583962583963191609Brucella melitensis M28 chromosome chromosome 1, complete sequencequeuine tRNA-ribosyltransferase3e-48192
NC_017246:956868:962897962897963505609Brucella melitensis M5-90 chromosome chromosome I, completequeuine tRNA-ribosyltransferase3e-48192
NC_017248:953131:959160959160959768609Brucella melitensis NI chromosome chromosome I, complete sequencequeuine tRNA-ribosyltransferase3e-48192
NC_013119:942079:948123948123948728606Brucella microti CCM 4915 chromosome 1, complete sequence3e-48192
NC_015857:963570:969613969613970218606Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-47189
NC_017251:937786:943809943809944438630Brucella suis 1330 chromosome I, complete genome9e-52204
NC_004310:937800:943823943823944452630Brucella suis 1330 chromosome I, complete sequence9e-52204
NC_010169:957565:963609963609964217609Brucella suis ATCC 23445 chromosome I, complete sequencetRNA-guanine transglycosylase2e-48193
NC_016797:937753:943776943776944405630Brucella suis VBI22 chromosome I, complete sequence9e-52204
NC_014657:291567:2915672915672926401074Caldicellulosiruptor owensensis OL chromosome, complete genomequeuine tRNA-ribosyltransferase1e-105383
NC_019815:761480:7614807614807626161137Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiqueuine tRNA-ribosyltransferase6e-119427
NC_020299:127480:1298361298361309721137Candidatus Kinetoplastibacterium oncopeltii TCC290E, completequeuine tRNA-ribosyltransferase1e-119430
NC_014355:3248386:3254598325459832557551158Candidatus Nitrospira defluvii, complete genomequeuine tRNA-ribosyltransferase4e-94345
NC_015391:695350:7137677137677149121146Carnobacterium sp. 17-4 chromosome, complete genomequeuine tRNA-ribosyltransferase4e-101368
NC_011027:817311:8265338265338276661134Chlorobaculum parvum NCIB 8327, complete genomequeuine tRNA-ribosyltransferase3e-90332
NC_011898:598014:6179246179246190451122Clostridium cellulolyticum H10, complete genomequeuine tRNA-ribosyltransferase1e-114413
NC_014328:3682000:3692185369218536933091125Clostridium ljungdahlii ATCC 49587 chromosome, complete genomequeuine tRNA-ribosyltransferase1e-96353
NC_017030:6061070:6064751606475160659201170Corallococcus coralloides DSM 2259 chromosome, complete genomequeuine tRNA-ribosyltransferase1e-87323
NC_016801:170876:1953571953571966491293Corynebacterium diphtheriae C7 (beta) chromosome, complete genomequeuine tRNA-ribosyltransferase6e-60231
NC_016790:134951:1569311569311582231293Corynebacterium diphtheriae VA01 chromosome, complete genomequeuine tRNA-ribosyltransferase6e-60231
NC_010545:2229125:2250061225006122514971437Corynebacterium urealyticum DSM 7109, complete genomequeuine tRNA-ribosyltransferase1e-64247
NC_011884:732000:7320567320567332011146Cyanothece sp. PCC 7425, complete genomequeuine tRNA-ribosyltransferase8e-93340
NC_015914:2769042:2770458277045827715881131Cyclobacterium marinum DSM 745 chromosome, complete genomeQueuine tRNA-ribosyltransferase1e-93343
NC_018697:1343756:1346972134697213480871116Cycloclasticus sp. P1 chromosome, complete genomeQueuine tRNA-ribosyltransferase1e-159563
NC_012526:2483000:2490232249023224914461215Deinococcus deserti VCD115, complete genomeputative queuine tRNA-ribosyltransferase1e-98360
NC_008025:316302:3291583291583303241167Deinococcus geothermalis DSM 11300, complete genomequeuine tRNA-ribosyltransferase4e-97355
NC_014958:629459:6420806420806432191140Deinococcus maricopensis DSM 21211 chromosome, complete genomeQueuine tRNA-ribosyltransferase4e-99361
NC_015161:84526:99083990831002581176Deinococcus proteolyticus MRP chromosome, complete genomeQueuine tRNA-ribosyltransferase2e-100366
NC_001263:2574755:2583500258350025846841185Deinococcus radiodurans R1 chromosome 1, complete sequencequeuine tRNA ribosyltransferase4e-99361
NC_020409:192508:2141492141492152611113Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeQueuine tRNA-ribosyltransferase2e-111402
NC_012778:748143:7690467690467701821137Eubacterium eligens ATCC 27750, complete genomequeuine tRNA-ribosyltransferase5e-98358
NC_017095:1461520:1474436147443614755601125Fervidobacterium pennivorans DSM 9078 chromosome, complete genometRNA-guanine transglycosylase2e-94345
NC_014472:294775:3202883202883213641077Flavobacteriales bacterium HTCC2170 chromosome, complete genomequeuine tRNA-ribosyltransferase6e-86318
NC_008601:1151653:1161389116138911624921104Francisella tularensis subsp. novicida U112, complete genomequeuine tRNA-ribosyltransferase6e-153540
NC_005125:839000:8539448539448550801137Gloeobacter violaceus PCC 7421, complete genometransfer RNA-guanine transglycosylase3e-93342
NC_015954:1222776:1241330124133012428111482Halophilic archaeon DL31 chromosome, complete genome7-cyano-7-deazaguanine tRNA-ribosyltransferase1e-21104
NC_008789:1837493:1855016185501618561641149Halorhodospira halophila SL1, complete genomequeuine tRNA-ribosyltransferase1e-155549
NC_008527:125723:1451401451401462881149Lactococcus lactis subsp. cremoris SK11, complete genomeQueuine/archaeosine tRNA-ribosyltransferase5e-102371
NC_008510:995612:1016889101688910180131125Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Queuine tRNA-ribosyltransferase1e-84313
NC_013192:1824174:1841398184139818425791182Leptotrichia buccalis DSM 1135, complete genomequeuine tRNA-ribosyltransferase2e-102372
NC_009440:2151638:2172935217293521744311497Metallosphaera sedula DSM 5348 chromosome, complete genome7-cyano-7-deazaguanine tRNA-ribosyltransferase4e-1065.9
NC_014122:773825:7770517770517789911941Methanocaldococcus infernus ME chromosome, complete genomearchaeosine tRNA-ribosyltransferase9e-22104
NC_020389:1083517:1105010110501011064821473Methanosarcina mazei Tuc01, complete genomearchaeosine tRNA-ribosyltransferase type 15e-25115
NC_007681:600187:6154386154386174622025Methanosphaera stadtmanae DSM 3091, complete genomepredicted queuine/archaeosine tRNA-ribosyltransferase4e-22105
NC_010172:3413392:3416887341688734180381152Methylobacterium extorquens PA1, complete genomequeuine tRNA-ribosyltransferase2e-105382
NC_015711:7601733:7607997760799776090761080Myxococcus fulvus HW-1 chromosome, complete genomequeuine tRNA-ribosyltransferase3e-84311
NC_013016:656000:6610446610446621591116Neisseria meningitidis alpha14 chromosome, complete genomequeuine tRNA-ribosyltransferase2e-125449
NC_017505:751836:7535217535217546361116Neisseria meningitidis alpha710 chromosome, complete genomeputative queuine tRNA-ribosyltransferase4e-126451
NC_017516:1535904:1554555155455515556701116Neisseria meningitidis H44/76 chromosome, complete genomequeuine tRNA-ribosyltransferase3e-125448
NC_017514:1491235:1506430150643015075451116Neisseria meningitidis M01-240149 chromosome, complete genomequeuine tRNA-ribosyltransferase4e-126451
NC_017515:1527461:1542656154265615437711116Neisseria meningitidis M04-240196 chromosome, complete genomequeuine tRNA-ribosyltransferase2e-125449
NC_003112:744476:7496207496207507351116Neisseria meningitidis MC58, complete genomequeuine tRNA-ribosyltransferase3e-125448
NC_014935:1287494:1291801129180112929251125Nitratifractor saLSUginis DSM 16511 chromosome, complete genometRNA-guanine transglycosylase4e-96351
NC_007614:2764848:2767140276714027682431104Nitrosospira multiformis ATCC 25196 chromosome 1, completequeuine tRNA-ribosyltransferase1e-133476
NC_009454:1042592:1062926106292610640381113Pelotomaculum thermopropionicum SI, complete genomequeuine tRNA-ribosyltransferase4e-112404
NC_015379:1151143:1174859117485911759921134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,tRNA-guanine transglycosylase, (queuine tRNA-ribosyltransferase)0744
NC_020829:4246847:4249149424914942502671119Pseudomonas denitrificans ATCC 13867, complete genomequeuine tRNA-ribosyltransferase0680
NC_016830:1182765:1204476120447612056091134Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein0744
NC_004129:5723787:5726104572610457272371134Pseudomonas fluorescens Pf-5, complete genomequeuine tRNA-ribosyltransferase0751
NC_007492:5214709:5219534521953452206671134Pseudomonas fluorescens PfO-1, complete genomequeuine tRNA-ribosyltransferase0758
NC_010501:4787963:4788343478834347894761134Pseudomonas putida W619, complete genomequeuine tRNA-ribosyltransferase0721
NC_009376:1:2688026880283671488Pyrobaculum arsenaticum DSM 13514 chromosome, complete genome7-cyano-7-deazaguanine tRNA-ribosyltransferase1e-21104
NC_016885:2091918:2136268213626821377551488Pyrobaculum oguniense TE7 chromosome, complete genometRNA-guanine transglycosylase, various specificities5e-22105
NC_016645:1838405:1879021187902118817052685Pyrobaculum sp. 1860 chromosome, complete genometype II secretion system protein E8e-1478.2
NC_015931:71361:9111291112926831572Pyrolobus fumarii 1A, complete genometRNA-guanine transglycosylase6e-2099
NC_015760:2009425:2021038202103820221801143Streptococcus salivarius CCHSS3, complete genomequeuine tRNA-ribosyltransferase4e-99361
NC_006449:1606948:1616734161673416178761143Streptococcus thermophilus CNRZ1066, complete genomequeuine tRNA-ribosyltransferase7e-99360
NC_006448:1604627:1614422161442216155641143Streptococcus thermophilus LMG 18311, complete genomequeuine tRNA-ribosyltransferase5e-99361
NC_010475:2896000:2902453290245329036101158Synechococcus sp. PCC 7002, complete genomequeuine tRNA-ribosyltransferase8e-92337
NC_015499:119200:1644151644151655181104Thermodesulfobium narugense DSM 14796 chromosome, complete genomequeuine tRNA-ribosyltransferase4e-86318
NC_008698:310069:3253583253583269891632Thermofilum pendens Hrk 5, complete genometRNA-guanine transglycosylases, various specificities6e-23108
NC_002689:1548000:1580555158055515824531899Thermoplasma volcanium GSS1, complete genomeArchaeosine tRNA-ribosyltransferase7e-2098.6
NC_016070:1657500:1680673168067316821961524Thermoproteus tenax Kra 1, complete genomequeuine tRNA-ribosyltransferase7e-2098.6
NC_015315:1347982:1354138135413813556641527Thermoproteus uzoniensis 768-20 chromosome, complete genome7-cyano-7-deazaguanine tRNA-ribosyltransferase3e-2099.8
NC_011653:1728000:1731684173168417327871104Thermosipho africanus TCF52B, complete genometgt queuine tRNA-ribosyltransferase4e-96352
NC_009828:469778:4749554749554761361182Thermotoga lettingae TMO, complete genomequeuine tRNA-ribosyltransferase3e-85315
NC_014926:295988:3136763136763147761101Thermovibrio ammonificans HB-1 chromosome, complete genomequeuine tRNA-ribosyltransferase1e-114412
NC_016148:678175:6817436817436828641122Thermovirga lienii DSM 17291 chromosome, complete genometRNA-guanine transglycosylase4e-105381
NC_015581:1133775:1137355113735511384701116Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeQueuine tRNA-ribosyltransferase3e-164577
NC_013889:1382705:1382705138270513838201116Thioalkalivibrio sp. K90mix chromosome, complete genomequeuine tRNA-ribosyltransferase8e-156550
NC_018012:4184500:4184564418456441856641101Thiocystis violascens DSM 198 chromosome, complete genometRNA-guanine transglycosylase3e-154545
NC_015144:1333179:1336965133696513380951131Weeksella virosa DSM 16922 chromosome, complete genomequeuine tRNA-ribosyltransferase4e-86318
NC_017271:2789667:2807936280793628090811146Xanthomonas campestris pv. raphani 756C chromosome, completequeuine tRNA-ribosyltransferase5e-149527
NC_007508:3034718:3051654305165430527991146Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomequeuine tRNA-ribosyltransferase3e-149528