Pre_GI: BLASTP Hits

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Query: NC_012660:5571500:5574438 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5574438, End: 5574776, Length: 339

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1151143:117603611760361176374339Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Sec protein secretion system, subunit yajC4e-44176
NC_016830:1182765:120565312056531205988336Pseudomonas fluorescens F113 chromosome, complete genomeprotein YajC3e-43173
NC_007492:5214709:521915552191555219490336Pseudomonas fluorescens PfO-1, complete genomeYajC7e-43172
NC_004129:5723787:572571857257185726056339Pseudomonas fluorescens Pf-5, complete genomepreprotein translocase subunit YajC1e-41168
NC_010501:4787963:478796347879634788298336Pseudomonas putida W619, complete genomepreprotein translocase, YajC subunit6e-41165
NC_020829:4246847:424877442487744249115342Pseudomonas denitrificans ATCC 13867, complete genomepreprotein translocase subunit YajC2e-32137
NC_008789:1837493:185420518542051854549345Halorhodospira halophila SL1, complete genomepreprotein translocase, YajC subunit4e-2199.8
NC_018012:3401854:341959834195983419933336Thiocystis violascens DSM 198 chromosome, complete genomeprotein translocase subunit yajC1e-1995.1
NC_007508:3034718:305116830511683051521354Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomepreprotein translocase subunit YajC2e-1891.3
NC_008601:1151653:115803511580351158391357Francisella tularensis subsp. novicida U112, complete genomepreprotein translocase family protein3e-1890.5
NC_020299:127480:129407129407129760354Candidatus Kinetoplastibacterium oncopeltii TCC290E, completepreprotein translocase subunit YajC4e-1889.7
NC_017271:2789667:280745028074502807803354Xanthomonas campestris pv. raphani 756C chromosome, completepreprotein translocase subunit YajC9e-1889
NC_018697:1343756:134657613465761346935360Cycloclasticus sp. P1 chromosome, complete genomePreprotein translocase subunit YajC2e-1787.4
NC_015581:1133775:113681711368171137251435Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomepreprotein translocase subunit YajC3e-1787
NC_008610:1068429:107417410741741074515342Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),preprotein translocase, YajC subunit4e-1786.7
NC_009465:938378:941152941152941493342Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase YajC subunit1e-1582
NC_008789:1837493:185456718545671854938372Halorhodospira halophila SL1, complete genomepreprotein translocase, YajC subunit2e-1374.3
NC_017192:497950:516031516031516306276Arcobacter sp. L, complete genomepreprotein translocase subunit7e-1165.9
NC_010830:475248:488355488355488681327Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-1065.5
NC_010382:3783879:380793838079383808201264Lysinibacillus sphaericus C3-41, complete genomehypothetical protein2e-1064.3
NC_014355:3248386:325425432542543254574321Candidatus Nitrospira defluvii, complete genomepreprotein translocase subunit YajC2e-1063.9
NC_012034:438000:443657443657444022366Anaerocellum thermophilum DSM 6725, complete genomepreprotein translocase, YajC subunit1e-0961.6
NC_014392:412916:418889418889419254366Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomepreprotein translocase, YajC subunit1e-0961.6
NC_015949:2101302:212248221224822122847366Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomepreprotein translocase subunit YajC2e-0961.2
NC_014721:373607:376149376149376514366Caldicellulosiruptor kristjanssonii 177R1B chromosome, completepreprotein translocase, yajc subunit2e-0961.2
NC_014720:2420455:245389424538942454259366Caldicellulosiruptor kronotskyensis 2002 chromosome, completepreprotein translocase, yajc subunit2e-0961.2
NC_008686:1383891:138557213855721385904333Paracoccus denitrificans PD1222 chromosome 1, complete sequencepreprotein translocase, YajC subunit3e-0960.5
NC_014657:291567:293832293832294200369Caldicellulosiruptor owensensis OL chromosome, complete genomepreprotein translocase, yajc subunit6e-0959.7
NC_007614:2764848:276676227667622766947186Nitrosospira multiformis ATCC 25196 chromosome 1, completepreprotein translocase YajC subunit1e-0858.9
NC_011059:2272747:229226322922632292616354Prosthecochloris aestuarii DSM 271, complete genomepreprotein translocase, YajC subunit1e-0858.2
NC_016940:3696570:371788237178823718226345Saprospira grandis str. Lewin chromosome, complete genomepreprotein translocase subunit YajC2e-0857.4
NC_011565:190406:203423203423203761339Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,preprotein translocase YajC subunit2e-0857.4
NC_010571:4483500:450793945079394508283345Opitutus terrae PB90-1, complete genomepreprotein translocase, YajC subunit3e-0857.4
NC_006156:685344:692416692416692730315Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein3e-0857
NC_017515:1653306:165537116553711655637267Neisseria meningitidis M04-240196 chromosome, complete genomepreprotein translocase subunit YajC3e-0857
NC_014328:3682000:369182336918233692149327Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein4e-0857
NC_015500:987641:101288910128891013293405Treponema brennaborense DSM 12168 chromosome, complete genomepreprotein translocase, YajC subunit3e-0753.9
NC_015391:695350:715051715051715356306Carnobacterium sp. 17-4 chromosome, complete genomepreprotein translocase subunit YajC9e-0752.4
NC_011725:4373721:439584743958474396107261Bacillus cereus B4264 chromosome, complete genomepreprotein translocase subunit YajC2e-0651.2