Pre_GI: BLASTP Hits

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Query: NC_012660:5571500:5571583 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5571583, End: 5572497, Length: 915

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1151143:117831611783161179230915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Sec protein secretion system, subunit SecF1e-157555
NC_007492:5214709:521629552162955217209915Pseudomonas fluorescens PfO-1, complete genomeprotein export protein SecF1e-150532
NC_016830:1182765:120793012079301208844915Pseudomonas fluorescens F113 chromosome, complete genomeprotein SecF3e-150531
NC_018012:3401854:342196534219653422912948Thiocystis violascens DSM 198 chromosome, complete genomeprotein translocase subunit secF7e-86317
NC_015581:1133775:1133775113377511348211047Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeprotein-export membrane protein SecF1e-76286
NC_018697:1343756:134375613437561344691936Cycloclasticus sp. P1 chromosome, complete genomePreprotein translocase subunit SecF5e-75281
NC_008610:1068429:107138710713871072313927Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),protein-export membrane protein SecF3e-69262
NC_009465:938378:938378938378939292915Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase SecF subunit9e-69260
NC_008601:1151653:115507811550781156022945Francisella tularensis subsp. novicida U112, complete genomepreprotein translocase, subunit F, membrane protein1e-68260
NC_008789:1837493:185138018513801852342963Halorhodospira halophila SL1, complete genomeprotein-export membrane protein SecF7e-61234
NC_012559:978419:978419978419979399981Laribacter hongkongensis HLHK9, complete genomeSecF5e-60231
NC_015722:1050023:105002310500231050934912Candidatus Midichloria mitochondrii IricVA chromosome, completepreprotein translocase subunit SecF9e-59227
NC_013939:106681:106681106681107580900Deferribacter desulfuricans SSM1, complete genomepreprotein translocase subunit F1e-55216
NC_017192:497950:517951517951518919969Arcobacter sp. L, complete genomepreprotein translocase subunit SecF2e-51202
NC_013520:718732:720003720003720896894Veillonella parvula DSM 2008, complete genomeprotein-export membrane protein SecF6e-50197
NC_015557:114648:114648114648115529882Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein-export membrane protein SecF8e-49194
NC_020411:114683:114683114683115564882Hydrogenobaculum sp. HO, complete genomeprotein-export membrane protein SecF8e-49194
NC_015587:114684:114684114684115565882Hydrogenobaculum sp. SHO chromosome, complete genomeprotein-export membrane protein SecF8e-49194
NC_007508:3034718:304807530480753049043969Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeprotein export protein SecF1e-48193
NC_017271:2789667:280419728041972805165969Xanthomonas campestris pv. raphani 756C chromosome, completeprotein-export membrane protein SecF4e-48191
NC_018664:1795223:181566518156651816531867Clostridium acidurici 9a chromosome, complete genomeprotein-export membrane protein SecF9e-48190
NC_011059:1:151901519016119930Prosthecochloris aestuarii DSM 271, complete genomeprotein-export membrane protein SecF9e-45180
NC_012667:703852:728470728470729372903Vibrio cholerae MJ-1236 chromosome 2, complete genomeprotein-export membrane protein SecF5e-44178
NC_013501:1691532:169509316950931696019927Rhodothermus marinus DSM 4252, complete genomeprotein-export membrane protein SecF8e-44177
NC_016024:156000:1578501578501591301281Candidatus Chloracidobacterium thermophilum B chromosome chromosomeprotein-export membrane protein SecF2e-43176
NC_014632:402500:414162414162415052891Ilyobacter polytropus DSM 2926 chromosome, complete genomeprotein translocase subunit secF4e-43175
NC_003454:1346500:135842613584261359379954Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeProtein translocase subunit secF9e-43174
NC_014355:3248386:325163932516393252556918Candidatus Nitrospira defluvii, complete genomeprotein-export membrane protein SecF2e-42172
NC_020409:512861:5278205278205288811062Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeProtein-export membrane protein SecF5e-42171
NC_007333:430000:4310844310844338192736Thermobifida fusca YX, complete genomeSecD/SecF/SecDF export membrane protein7e-42171
NC_013517:2909798:291486929148692915795927Sebaldella termitidis ATCC 33386, complete genomeprotein-export membrane protein SecF1e-40167
NC_013192:1941002:194753019475301948501972Leptotrichia buccalis DSM 1135, complete genomeprotein-export membrane protein SecF2e-40166
NC_007799:81723:849428494285823882Ehrlichia chaffeensis str. Arkansas, complete genomeprotein-export membrane protein SecF3e-40165
NC_010382:3783879:3801685380168538039102226Lysinibacillus sphaericus C3-41, complete genomeprotein-export membrane protein1e-39163
NC_013062:627000:6720266720266749412916Flavobacteriaceae bacterium 3519-10, complete genomeProtein-export membrane protein secD/ Protein-export membrane protein secF2e-39162
NC_013894:1194458:119536711953671196248882Thermocrinis albus DSM 14484 chromosome, complete genomeprotein-export membrane protein SecF8e-38157
NC_014041:4093190:4093190409319040961802991Zunongwangia profunda SM-A87 chromosome, complete genomebifunctional preprotein translocase subunit SecD/SecF2e-37156
NC_011146:603429:611304611304612245942Geobacter bemidjiensis Bem, complete genomeprotein-export membrane protein SecF6e-37154
NC_010571:4483500:4505305450530545078542550Opitutus terrae PB90-1, complete genomeprotein-export membrane protein SecD2e-36152
NC_015496:2155816:2172082217208221750632982Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeprotein-export membrane protein SecD2e-34146
NC_010546:4786000:480177948017794802705927Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprotein export membrane protein2e-34146
NC_004722:4333643:4346797434679743490612265Bacillus cereus ATCC 14579, complete genomeProtein translocase subunit SecD / Protein translocase subunit SecF5e-34145
NC_011725:4373721:4390032439003243922962265Bacillus cereus B4264 chromosome, complete genomebifunctional preprotein translocase subunit SecD/SecF5e-34144
NC_006156:685344:694552694552695451900Borrelia garinii PBi chromosome linear, complete sequenceprotein-export membrane protein9e-34144
NC_020054:2066510:2069969206996920730853117Fibrella aestuarina BUZ 2 drat genomeprotein-export membrane protein SecD1e-33143
NC_009455:273519:319927319927320832906Dehalococcoides sp. BAV1 chromosome, complete genomepreprotein translocase subunit SecF1e-28127
NC_017243:517684:519159519159520082924Brachyspira intermedia PWS/A chromosome, complete genomepreprotein translocase2e-28126
NC_012225:1575432:159131815913181592241924Brachyspira hyodysenteriae WA1, complete genomepreprotein translocase2e-28126
NC_014328:3682000:368741136874113688286876Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative protein-export membrane protein7e-28124
NC_015500:987641:1015053101505310163001248Treponema brennaborense DSM 12168 chromosome, complete genomeprotein-export membrane protein SecF5e-25115
NC_013174:1459730:1462763146276314638631101Jonesia denitrificans DSM 20603, complete genomeprotein-export membrane protein SecF9e-25114
NC_016932:1246235:1268031126803112691521122Corynebacterium pseudotuberculosis 316 chromosome, complete genomeprotein-export membrane protein secF6e-22105
NC_017031:1261289:1283101128310112842221122Corynebacterium pseudotuberculosis P54B96 chromosome, completeProtein-export membrane protein secF3e-22105
NC_017301:1261167:1282980128298012841011122Corynebacterium pseudotuberculosis C231 chromosome, completeProtein-export membrane protein secF3e-22105
NC_017303:1261311:1283123128312312842441122Corynebacterium pseudotuberculosis I19 chromosome, complete genomeProtein-export membrane protein secF3e-22105
NC_017305:1258840:1280652128065212817731122Corynebacterium pseudotuberculosis PAT10 chromosome, completeProtein-export membrane protein secF3e-22105
NC_017300:1258861:1280674128067412817951122Corynebacterium pseudotuberculosis 1002 chromosome, completeProtein-export membrane protein secF7e-22104
NC_016781:1261300:1283112128311212842331122Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeprotein-export membrane protein secF7e-22104
NC_014329:1261480:1283292128329212844131122Corynebacterium pseudotuberculosis FRC41 chromosome, completeprotein-export membrane protein7e-22104
NC_016785:1321700:1343344134334413444561113Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomepreprotein translocase subunit SecF2e-21103
NC_016788:1349500:1360442136044213615541113Corynebacterium diphtheriae HC04 chromosome, complete genomepreprotein translocase subunit SecF2e-21103
NC_016789:1334514:1407540140754014086521113Corynebacterium diphtheriae PW8 chromosome, complete genomepreprotein translocase subunit SecF1e-21103
NC_016801:1361597:1406860140686014079721113Corynebacterium diphtheriae C7 (beta) chromosome, complete genomepreprotein translocase subunit SecF1e-21103
NC_002935:1378566:1389519138951913906311113Corynebacterium diphtheriae NCTC 13129, complete genomeprotein export protein SecF4e-21102
NC_016787:1350676:1356938135693813580501113Corynebacterium diphtheriae HC03 chromosome, complete genomepreprotein translocase subunit SecF4e-21102
NC_016790:1319060:1333006133300613341181113Corynebacterium diphtheriae VA01 chromosome, complete genomepreprotein translocase subunit SecF4e-21102
NC_016782:1359000:1363862136386213649741113Corynebacterium diphtheriae 241 chromosome, complete genomepreprotein translocase subunit SecF3e-21102
NC_016783:1374464:1386040138604013871521113Corynebacterium diphtheriae INCA 402 chromosome, complete genomepreprotein translocase subunit SecF3e-21102
NC_016786:1359064:1363832136383213649441113Corynebacterium diphtheriae HC01 chromosome, complete genomepreprotein translocase subunit SecF3e-21102
NC_016799:1343020:1417183141718314182951113Corynebacterium diphtheriae 31A chromosome, complete genomepreprotein translocase subunit SecF3e-21102
NC_016800:1378728:1390324139032413914361113Corynebacterium diphtheriae BH8 chromosome, complete genomepreprotein translocase subunit SecF3e-21102
NC_016802:1317365:1362652136265213637641113Corynebacterium diphtheriae HC02 chromosome, complete genomepreprotein translocase subunit SecF3e-21102
NC_009465:938378:9392899392899411361848Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase SecD subunit2e-1273.6
NC_015581:1133775:1134831113483111367141884Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeprotein-export membrane protein SecD2e-1273.2
NC_018012:3401854:3420097342009734219531857Thiocystis violascens DSM 198 chromosome, complete genomeprotein-export membrane protein, SecD/SecF family9e-1271.2
NC_008686:1383891:1383891138389113855551665Paracoccus denitrificans PD1222 chromosome 1, complete sequenceprotein-export membrane protein SecD8e-1271.2
NC_016024:156000:1560731560731577611689Candidatus Chloracidobacterium thermophilum B chromosome chromosomeprotein-export membrane protein SecD4e-1168.9
NC_020409:512861:5288925288925304871596Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeProtein-export membrane protein secD3e-1066.2
NC_013501:1691532:1696041169604116979091869Rhodothermus marinus DSM 4252, complete genomeprotein-export membrane protein SecD6e-1065.1
NC_015500:987641:1013317101331710150531737Treponema brennaborense DSM 12168 chromosome, complete genomeprotein-export membrane protein SecD7e-1064.7
NC_008601:1151653:1156041115604111579781938Francisella tularensis subsp. novicida U112, complete genomepreprotein translocase, subunit D, membrane protein1e-0963.9
NC_014355:3248386:3252569325256932542181650Candidatus Nitrospira defluvii, complete genomeprotein-export membrane protein SecD3e-0962.4
NC_006156:685344:6928986928986945681671Borrelia garinii PBi chromosome linear, complete sequenceprotein export protein SecD4e-0962.4
NC_006833:1011537:1044453104445310459341482Wolbachia endosymbiont strain TRS of Brugia malayi, completePreprotein translocase subunit SecD4e-0962.4
NC_017243:517684:5201165201165216271512Brachyspira intermedia PWS/A chromosome, complete genomepreprotein translocase subunit SecD4e-0962.4
NC_008789:1837493:1852345185234518542011857Halorhodospira halophila SL1, complete genomeprotein-export membrane protein SecD5e-0962
NC_003413:181525:1834861834861850031518Pyrococcus furiosus DSM 3638, complete genomeprotein export protein SecD5e-0962
NC_012225:1575432:1589773158977315912841512Brachyspira hyodysenteriae WA1, complete genomepreprotein translocase subunit SecD5e-0962
NC_014122:967194:968495968495969343849Methanocaldococcus infernus ME chromosome, complete genomeSecD/SecF/SecDF export membrane protein6e-0961.6
NC_018697:1343756:1344695134469513465541860Cycloclasticus sp. P1 chromosome, complete genomePreprotein translocase subunit SecD8e-0961.2
NC_008610:1068429:1072310107231010741571848Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),protein-export membrane protein SecD1e-0860.5
NC_011059:1:1338113381151651785Prosthecochloris aestuarii DSM 271, complete genomeprotein-export membrane protein SecD1e-0860.5
NC_017515:1653306:1653306165330616551591854Neisseria meningitidis M04-240196 chromosome, complete genomeprotein-export membrane protein SecD3e-0859.7
NC_013009:562470:5632975632975648051509Neorickettsia risticii str. Illinois, complete genomeprotein-export membrane protein SecD3e-0859.3
NC_007798:547800:5486275486275501351509Neorickettsia sennetsu str. Miyayama, complete genomeprotein-export membrane protein SecD6e-0858.5
NC_000868:1730820:174955717495571750483927Pyrococcus abyssi GE5, complete genomeprotein export protein SecF8e-0858.2
NC_003413:181525:182599182599183489891Pyrococcus furiosus DSM 3638, complete genomeprotein export protein SecF9e-0857.8
NC_011146:603429:6096866096866112901605Geobacter bemidjiensis Bem, complete genomeprotein-export membrane protein SecD1e-0757.8
NC_005071:671084:6710846710846725711488Prochlorococcus marinus str. MIT 9313, complete genomepreprotein translocase subunit3e-0756.2
NC_012883:1603744:1620734162073416222541521Thermococcus sibiricus MM 739, complete genomeSecD protein-export membrane protein3e-0755.8
NC_013156:21781:269362693627784849Methanocaldococcus fervens AG86, complete genomeSecD/SecF/SecDF export membrane protein5e-0755.5
NC_017192:497950:5163865163865179511566Arcobacter sp. L, complete genomeprotein-export membrane protein SecD9e-0754.7
NC_015474:723553:7450717450717465881518Pyrococcus sp. NA2 chromosome, complete genomepreprotein translocase subunit SecD3e-0652.4
NC_000868:1730820:1748037174803717495601524Pyrococcus abyssi GE5, complete genomeprotein export protein SecD4e-0652.4
NC_017271:2789667:2805274280527428071421869Xanthomonas campestris pv. raphani 756C chromosome, completeprotein-export membrane protein SecD8e-0651.2
NC_007508:3034718:3049133304913330509771845Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeprotein export protein SecD8e-0651.2