Pre_GI: BLASTP Hits

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Query: NC_012660:4734363:4741061 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4741061, End: 4741222, Length: 162

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:3805640:381032338103233810631309Yersinia pseudotuberculosis IP 32953, complete genome4e-1373.2
NC_003143:1059580:106425410642541064562309Yersinia pestis CO92, complete genomeintegrase (partial)4e-1373.2
NC_008149:3556999:356015835601583560406249Yersinia pestis Nepal516, complete genomeintegrase5e-1373.2
NC_009656:4527457:4657608465760846589571350Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase7e-1372.4
NC_009832:4482500:4486861448686144878921032Serratia proteamaculans 568, complete genomeintegrase family protein2e-1271.2
NC_014029:331919:4017584017584027711014Yersinia pestis Z176003 chromosome, complete genomeintegrase2e-1270.9
NC_009832:4564752:4572097457209745731101014Serratia proteamaculans 568, complete genomeintegrase family protein3e-1270.5
NC_013421:701005:744192744192745166975Pectobacterium wasabiae WPP163, complete genomeintegrase family protein3e-1270.5
NC_009832:426993:4500724500724510851014Serratia proteamaculans 568, complete genomeintegrase family protein4e-1270.1
NC_004129:5481629:5491834549183454931711338Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family4e-1270.1
NC_012214:537000:557388557388558347960Erwinia pyrifoliae Ep1/96, complete genomeintegrase5e-1269.7
NC_012560:3698697:3720276372027637215231248Azotobacter vinelandii DJ, complete genomephage integrase5e-1269.7
NC_021150:3698696:3720275372027537215221248Azotobacter vinelandii CA6, complete genomephage integrase5e-1269.7
NC_004547:667988:6873806873806884021023Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phage integrase7e-1269.3
NC_016845:4498097:450306445030644503864801Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Phage integrase1e-1168.9
NC_011745:3405520:342713034271303427705576Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1167.4
NC_004578:895019:8995348995349009911458Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1167
NC_013892:1503162:1513287151328715142941008Xenorhabdus bovienii SS-2004 chromosome, complete genometyrosine recombinase-like4e-1166.6
NC_005773:866157:8716228716228728391218Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein5e-1166.6
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein6e-1166.2
NC_014532:3596097:3632063363206336330971035Halomonas elongata DSM 2581, complete genomesite-specific recombinase, phage integrase family6e-1166.2
NC_012962:3864000:386616338661633866405243Photorhabdus asymbiotica, complete genomeputative integrase-like protein6e-1166.2
NC_014228:3505320:3510397351039735114131017Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase5e-1166.2
NC_014228:3391500:340640634064063406693288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-1165.9
NC_009656:4527457:4572105457210545733881284Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase1e-1065.1
NC_008463:4566976:4589452458945245907321281Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative integrase2e-1064.7
NC_014228:3391500:3392691339269133936981008Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase2e-1064.7
NC_010554:2789722:2793999279399927950691071Proteus mirabilis HI4320, complete genomephage integrase3e-1063.5
NC_010939:1986263:200437920043792004945567Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative integrase4e-1063.2
NC_004631:4494000:4511590451159045126031014Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable phage integrase4e-1063.2
NC_003198:4513900:4528781452878145297941014Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage integrase4e-1063.2
NC_016832:4482437:4499858449985845008711014Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage integrase4e-1063.2
NC_012913:1041969:106300810630081063919912Aggregatibacter aphrophilus NJ8700, complete genomeintegrase6e-1062.8
NC_010067:3056774:307494730749473075873927Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0959.7
NC_011149:4677412:467964346796434680569927Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase5e-0959.7
NC_007005:1605000:1607964160796416093701407Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase2e-0858.2
NC_007005:830467:8359468359468371091164Pseudomonas syringae pv. syringae B728a, complete genome2e-0857.8
NC_009792:3245368:326593832659383266234297Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-0856.6
NC_009712:669647:689909689909690829921Candidatus Methanoregula boonei 6A8, complete genomephage integrase family protein4e-0650.1
NC_008609:251608:281900281900282808909Pelobacter propionicus DSM 2379, complete genometyrosine recombinase XerC5e-0649.7