Pre_GI: BLASTP Hits

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Query: NC_012660:4669500:4681468 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4681468, End: 4682445, Length: 978

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:7408466:7433212743321274342401029Streptomyces violaceusniger Tu 4113 chromosome, complete genomeSaccharopine dehydrogenase4e-70265
NC_009142:1701000:1717623171762317186721050Saccharopolyspora erythraea NRRL 2338, complete genomesaccharopine dehydrogenase4e-39162
NC_004129:3965947:3967677396767739687561080Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-36152
NC_020126:204216:2217962217962229141119Myxococcus stipitatus DSM 14675, complete genomehypothetical protein5e-32138
NC_014960:1670778:1673710167371016747651056Anaerolinea thermophila UNI-1, complete genomesaccharopine dehydrogenase family protein5e-1168.9
NC_011896:173197:1731971731971744531257Mycobacterium leprae Br4923, complete genomehypothetical protein8e-1064.7
NC_002677:173170:1731701731701744261257Mycobacterium leprae TN, complete genomehypothetical protein8e-1064.7
NC_017506:1832443:1850088185008818513291242Marinobacter adhaerens HP15 chromosome, complete genomesaccharopine dehydrogenase-like protein3e-0963.2
NC_007908:4677856:4677856467785646789711116Rhodoferax ferrireducens T118, complete genomeSaccharopine dehydrogenase8e-0961.6
NC_008740:1635137:1653147165314716543881242Marinobacter aquaeolei VT8, complete genomeSaccharopine dehydrogenase7e-0858.5
NC_000962:3288464:3305279330527933065351257Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein9e-0858.2
NC_002945:3246278:3261967326196732632231257Mycobacterium bovis AF2122/97, complete genomehypothetical protein9e-0858.2
NC_008769:3242453:3259440325944032606961257Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein9e-0858.2
NC_009525:3300456:3317271331727133185271257Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein9e-0858.2
NC_012207:3237440:3252267325226732535231257Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein9e-0858.2
NC_002755:3282785:3299600329960033008561257Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein9e-0858.2
NC_009565:3299937:3316752331675233180081257Mycobacterium tuberculosis F11, complete genomehypothetical protein9e-0858.2
NC_016804:3221818:3238805323880532400611257Mycobacterium bovis BCG str. Mexico chromosome, complete genomeTrans-acting enoyl reductase9e-0858.2
NC_017026:3282405:3299224329922433004801257Mycobacterium tuberculosis RGTB327 chromosome, complete genomeTrans-acting enoyl reductase9e-0858.2
NC_015848:3343731:3361900336190033631561257Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein2e-0756.6
NC_019950:3306419:3326209332620933274651257Mycobacterium canettii CIPT 140060008 complete genomePutative trans-acting enoyl reductase2e-0756.6
NC_010612:4654936:4655640465564046568961257Mycobacterium marinum M, complete genomehypothetical protein8e-0651.6