Pre_GI: BLASTP Hits

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Query: NC_012660:4669500:4672133 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4672133, End: 4672558, Length: 426

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:331610:363263363263363682420Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-34144
NC_017986:5797044:580438258043825804810429Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-31132
NC_009512:2782000:279641927964192796847429Pseudomonas putida F1, complete genomeprotein of unknown function DUF395, YeeE/YedE6e-31132
NC_008313:2142397:215713621571362157567432Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical membrane protein7e-30129
NC_012988:670101:681799681799682257459Methylobacterium extorquens DM4, complete genomehypothetical protein1e-28125
NC_012808:1220378:126689812668981267347450Methylobacterium extorquens AM1, complete genomehypothetical protein6e-29125
NC_007508:2756945:277758627775862778017432Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein3e-28123
NC_008782:2568027:259290825929082593330423Acidovorax sp. JS42, complete genomeprotein of unknown function DUF395, YeeE/YedE3e-27120
NC_009720:3210387:321731532173153217773459Xanthobacter autotrophicus Py2, complete genomeprotein of unknown function DUF395 YeeE/YedE3e-27120
NC_012968:865465:869861869861870274414Methylotenera mobilis JLW8, complete genomeprotein of unknown function DUF395 YeeE/YedE2e-26117
NC_018643:807405:820641820641821063423Alpha proteobacterium HIMB5 chromosome, complete genomehypothetical protein4e-26116
NC_008260:2961291:298384229838422984267426Alcanivorax borkumensis SK2, complete genomehypothetical protein1e-25115
NC_009952:2661268:268170526817052682142438Dinoroseobacter shibae DFL 12, complete genomehypothetical protein7e-25112
NC_008209:761487:761487761487761915429Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-23107
NC_010725:1419272:145626014562601456718459Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF395 YeeE/YedE1e-2098.6
NC_014623:4662990:466551246655124665961450Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-2097.1
NC_008095:5312926:531656453165645317034471Myxococcus xanthus DK 1622, complete genomeYeeE/YedE family protein2e-1994.4
NC_003911:1078949:107894910789491079380432Silicibacter pomeroyi DSS-3, complete genomeYeeE/YedE family protein1e-1581.6
NC_013923:45876:832188321883679462Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceprotein of unknown function DUF395 YeeE/YedE3e-0857.4
NC_007908:1946902:194751519475151947937423Rhodoferax ferrireducens T118, complete genomeprotein of unknown function DUF395, YeeE/YedE2e-0754.3
NC_010172:1522707:153608515360851536366282Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF395, YeeE/YedE2e-0754.3