Pre_GI: BLASTP Hits

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Query: NC_012660:4558122:4588931 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4588931, End: 4589125, Length: 195

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2328491:233344223334422333636195Pseudomonas fluorescens Pf-5, complete genome50S ribosomal protein L354e-29126
NC_002947:2809591:281211028121102812319210Pseudomonas putida KT2440, complete genome50S ribosomal protein L352e-27120
NC_009512:3618055:363556836355683635762195Pseudomonas putida F1, complete genomeribosomal protein L353e-27120
NC_009434:2577717:258897525889752589169195Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L359e-26115
NC_015740:2407500:244604024460402446234195Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete50S ribosomal protein L359e-26115
NC_015410:3209954:322573132257313225925195Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L352e-25114
NC_021150:2026496:203680720368072037001195Azotobacter vinelandii CA6, complete genome50S ribosomal protein L352e-24111
NC_012560:2026483:203679420367942036988195Azotobacter vinelandii DJ, complete genome50S ribosomal protein L352e-24111
NC_002516:3079850:310402331040233104217195Pseudomonas aeruginosa PAO1, complete genome50S ribosomal protein L352e-23107
NC_011770:2499432:249943224994322499626195Pseudomonas aeruginosa LESB58, complete genome50S ribosomal protein L352e-23107
NC_008463:2467219:246975424697542469948195Pseudomonas aeruginosa UCBPP-PA14, complete genome50S ribosomal protein L352e-23107
NC_009656:2512733:251526825152682515462195Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L352e-23107
NC_018080:2288700:229123522912352291429195Pseudomonas aeruginosa DK2 chromosome, complete genome50S ribosomal protein L352e-23107
NC_017506:1100679:110325111032511103433183Marinobacter adhaerens HP15 chromosome, complete genome50S ribosomal protein L351e-1478.2
NC_014965:1428902:143357114335711433765195Vibrio vulnificus MO6-24/O chromosome I, complete sequence50S ribosomal protein L35p2e-1477.8
NC_018691:3525430:357235035723503572544195Alcanivorax dieselolei B5 chromosome, complete genome50S ribosomal protein L356e-1476.3
NC_002506:298868:309079309079309273195Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete50S ribosomal protein L352e-1374.7
NC_012580:301500:310278310278310472195Vibrio cholerae M66-2 chromosome II, complete sequence50S ribosomal protein L352e-1374.7
NC_012583:335000:343948343948344142195Vibrio cholerae O395 chromosome chromosome II, complete sequenceribosomal protein L352e-1374.7
NC_012667:1045782:105107310510731051267195Vibrio cholerae MJ-1236 chromosome 2, complete genome50S ribosomal protein L352e-1374.7
NC_016446:26500:355243552435718195Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete50S ribosomal protein L352e-1374.7
NC_016945:300000:309046309046309240195Vibrio cholerae IEC224 chromosome II, complete sequence50S ribosomal protein L352e-1374.7
NC_017514:1491235:150332515033251503618294Neisseria meningitidis M01-240149 chromosome, complete genome50S ribosomal protein L352e-1271.2
NC_017516:1535904:155145115514511551744294Neisseria meningitidis H44/76 chromosome, complete genome50S ribosomal protein L352e-1271.2
NC_017518:828662:831261831261831458198Neisseria meningitidis NZ-05/33 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_017515:1527461:153955115395511539748198Neisseria meningitidis M04-240196 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_017505:751836:757544757544757741198Neisseria meningitidis alpha710 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_013016:656000:665067665067665264198Neisseria meningitidis alpha14 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_003112:744476:753642753642753839198Neisseria meningitidis MC58, complete genome50S ribosomal protein L353e-1270.5
NC_015731:867377:912826912826913023198Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L352e-1168.2
NC_015144:1333179:134179413417941341991198Weeksella virosa DSM 16922 chromosome, complete genome50S ribosomal protein L352e-1168.2
NC_013959:1723037:174413517441351744332198Sideroxydans lithotrophicus ES-1 chromosome, complete genomeribosomal protein L352e-1167.8
NC_010830:718614:721330721330721524195Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1167.8
NC_015638:23654:397243972439921198Lacinutrix sp. 5H-3-7-4 chromosome, complete genome50S ribosomal protein L352e-1167.8
NC_004757:1021355:104129910412991041496198Nitrosomonas europaea ATCC 19718, complete genome50S ribosomal protein L357e-1165.9
NC_014972:1621850:162442616244261624623198Desulfobulbus propionicus DSM 2032 chromosome, complete genome50S ribosomal protein L35P7e-1165.9
NC_014472:294775:311945311945312142198Flavobacteriales bacterium HTCC2170 chromosome, complete genomeribosomal protein L359e-1165.5
NC_015496:2371163:238037323803732380570198Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeribosomal protein L351e-1065.5
NC_008702:1153344:116527511652751165472198Azoarcus sp. BH72, complete genome50S ribosomal protein L352e-1064.7
NC_007517:1561466:158191015819101582107198Geobacter metallireducens GS-15, complete genomeribosomal protein L352e-1064.7
NC_007498:1666242:166878716687871668984198Pelobacter carbinolicus DSM 2380, complete genomeribosomal protein L352e-1064.3
NC_019903:175481:175941175941176138198Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,50S ribosomal protein L353e-1063.9
NC_013166:1841446:185880218588021858999198Kangiella koreensis DSM 16069, complete genomeribosomal protein L353e-1063.5
NC_008781:2981868:299389729938972994100204Polaromonas naphthalenivorans CJ2, complete genomeribosomal protein L354e-1063.5
NC_015167:2700218:270356027035602703748189Cellulophaga lytica DSM 7489 chromosome, complete genome50S ribosomal protein L359e-1062.4
NC_007298:2856104:287188528718852872082198Dechloromonas aromatica RCB, complete genome50S ribosomal protein L352e-0961.6
NC_007086:1988000:198807219880721988269198Xanthomonas campestris pv. campestris str. 8004, complete genome50S ribosomal protein L351e-0961.6
NC_003902:2903493:292295029229502923147198Xanthomonas campestris pv. campestris str. ATCC 33913, complete50S ribosomal protein L351e-0961.6
NC_017271:2906000:292547629254762925673198Xanthomonas campestris pv. raphani 756C chromosome, complete50S ribosomal protein L351e-0961.6
NC_015222:2089767:210094021009402101137198Nitrosomonas sp. AL212 chromosome, complete genome50S ribosomal protein L352e-0961.2
NC_015565:1163148:117694611769461177140195Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete50S ribosomal protein L352e-0961.2
NC_016002:1326500:132945913294591329656198Pseudogulbenkiania sp. NH8B, complete genome50S ribosomal protein L353e-0960.8
NC_002939:1634843:166463116646311664828198Geobacter sulfurreducens PCA, complete genomeribosomal protein L353e-0960.5
NC_014910:2585747:259225325922532592456204Alicycliphilus denitrificans BC chromosome, complete genomeribosomal protein l357e-0959.3
NC_008609:2446246:248854324885432488740198Pelobacter propionicus DSM 2379, complete genomeribosomal protein L357e-0959.3
NC_007484:1229899:125080212508021250999198Nitrosococcus oceani ATCC 19707, complete genome50S ribosomal protein L359e-0958.9
NC_011992:1505106:151819715181971518400204Acidovorax ebreus TPSY, complete genomeribosomal protein L352e-0858.2
NC_014931:4234288:425729542572954257498204Variovorax paradoxus EPS chromosome, complete genomeribosomal protein L352e-0857.8
NC_014371:177536:206019206019206216198Prevotella melaninogenica ATCC 25845 chromosome chromosome II,ribosomal protein L353e-0857.4
NC_014004:66631:871738717387370198Candidatus Sulcia muelleri DMIN chromosome, complete genomeLSU ribosomal protein L35P4e-0856.6
NC_017046:1358531:137168513716851371897213Salmonella enterica subsp. enterica serovar Typhimurium str. 79850S ribosomal protein L356e-0856.2
NC_016857:1358456:137161013716101371822213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7450S ribosomal protein L356e-0856.2
NC_007613:1353500:135350413535041353701198Shigella boydii Sb227, complete genome50S ribosomal subunit protein A8e-0855.8
NC_004631:1271500:128321512832151283412198Salmonella enterica subsp. enterica serovar Typhi Ty2, complete50S ribosomal protein L358e-0855.8
NC_003197:1401603:141477214147721414969198Salmonella typhimurium LT2, complete genome50S ribosomal protein L358e-0855.8
NC_020063:2011019:202502720250272025224198Enterobacteriaceae bacterium strain FGI 57, complete genomeLSU ribosomal protein L35P8e-0855.8
NC_011083:1408202:141981514198151420012198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal protein L358e-0855.8
NC_006511:1579776:158387115838711584068198Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L358e-0855.8
NC_013850:2103469:214267121426712142868198Klebsiella variicola At-22 chromosome, complete genomeribosomal protein L358e-0855.8
NC_010658:1772994:179153417915341791731198Shigella boydii CDC 3083-94, complete genomeribosomal protein L358e-0855.8
NC_003198:1693623:169771816977181697915198Salmonella enterica subsp. enterica serovar Typhi str. CT18,50S ribosomal protein L358e-0855.8
NC_010102:1703172:170726717072671707464198Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-0855.8
NC_011205:1938574:194266919426691942866198Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185350S ribosomal protein L358e-0855.8
NC_016863:1359769:137293813729381373135198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L358e-0855.8
NC_016860:1399290:141245914124591412656198Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L358e-0855.8
NC_016856:1411579:142474814247481424945198Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S50S ribosomal protein L358e-0855.8
NC_016832:1269018:128218812821881282385198Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,50S ribosomal subunit protein A8e-0855.8
NC_016831:1166868:118003411800341180231198Salmonella enterica subsp. enterica serovar Gallinarum/pullorum50S ribosomal subunit protein L358e-0855.8
NC_016810:1358456:137162513716251371822198Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L358e-0855.8
NC_011294:1810285:181438018143801814577198Salmonella enterica subsp. enterica serovar Enteritidis str50S ribosomal protein L358e-0855.8
NC_011283:2185462:220926222092622209459198Klebsiella pneumoniae 342 chromosome, complete genome50S ribosomal protein L358e-0855.8
NC_011274:1850086:185418118541811854378198Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9150S ribosomal protein L358e-0855.8
NC_014448:626909:636963636963637151189Mycoplasma hyorhinis HUB-1 chromosome, complete genome50S ribosomal protein L351e-0755.5
NC_016829:624971:635024635024635212189Mycoplasma hyorhinis GDL-1 chromosome, complete genome50S ribosomal protein L351e-0755.5
NC_017519:672462:677567677567677755189Mycoplasma hyorhinis MCLD chromosome, complete genome50S ribosomal protein L351e-0755.5
NC_012912:2216749:223572522357252235922198Dickeya zeae Ech1591, complete genomeribosomal protein L351e-0755.1
NC_012880:2425330:243053424305342430731198Dickeya dadantii Ech703, complete genomeribosomal protein L351e-0755.1
NC_014228:1712339:175503917550391755236198Xenorhabdus nematophila ATCC 19061, complete genome50S ribosomal subunit protein A1e-0755.1
NC_014500:2589089:259329725932972593494198Dickeya dadantii 3937 chromosome, complete genome50S ribosomal subunit protein L352e-0754.7
NC_014098:2332938:233484023348402335040201Bacillus tusciae DSM 2912 chromosome, complete genomeribosomal protein L352e-0754.3
NC_011772:4487378:450482845048284505028201Bacillus cereus G9842, complete genomeribosomal protein L352e-0754.3
NC_011979:3712845:371687437168743717071198Geobacter sp. FRC-32, complete genomeribosomal protein L352e-0754.3
NC_009483:3024115:305170930517093051906198Geobacter uraniireducens Rf4 chromosome, complete genome50S ribosomal protein L353e-0753.9
NC_015844:3524175:352639835263983526595198Zobellia galactanivorans, complete genome50S ribosomal protein L351e-0651.6
NC_014364:2751662:277144127714412771641201Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeribosomal protein L354e-0650.4
NC_014328:3747973:376721637672163767413198Clostridium ljungdahlii ATCC 49587 chromosome, complete genome50S ribosomal protein L354e-0650.1