Pre_GI: BLASTP Hits

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Query: NC_012660:3744868:3760168 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3760168, End: 3761127, Length: 960

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4809210:480921048092104810106897Pseudomonas fluorescens F113 chromosome, complete genomebeta-lactamase class C-related penicillin binding protein4e-127454
NC_007802:1991211:200289420028942003718825Jannaschia sp. CCS1, complete genomebeta-lactamase1e-52206
NC_016622:282631:2944242944242955451122Azospirillum lipoferum 4B, complete genomeputative Beta-lactamase8e-31134
NC_002939:1505701:1506745150674515077581014Geobacter sulfurreducens PCA, complete genomebeta-lactamase5e-25115
NC_014622:4922977:4980081498008149812381158Paenibacillus polymyxa SC2 chromosome, complete genomed-alanyl-d-alanine carboxypeptidase (penicillin-binding protein)1e-1687.4
NC_010546:3071377:3073581307358130789535373Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein5e-1582
NC_014666:4547873:4548457454845745496651209Frankia sp. EuI1c chromosome, complete genomebeta-lactamase2e-1170.1
NC_015690:7334786:7344146734414673463052160Paenibacillus mucilaginosus KNP414 chromosome, complete genomealkaline D-peptidase; serine peptidase; merops family s123e-1169.7
NC_016935:7426389:7436208743620874383642157Paenibacillus mucilaginosus 3016 chromosome, complete genomealkaline D-peptidase, serine peptidase, merops family s123e-1169.3
NC_012491:6143928:6165290616529061664741185Brevibacillus brevis NBRC 100599, complete genomeputative D-stereospecific peptide hydrolase5e-1065.5
NC_013729:4871430:4887632488763248887861155Kribbella flavida DSM 17836, complete genomebeta-lactamase6e-1065.1
NC_015957:7348269:7389614738961473908401227Streptomyces violaceusniger Tu 4113 chromosome, complete genomebeta-lactamase1e-0964.3
NC_015953:3456535:3504980350498035061971218Streptomyces sp. SirexAA-E chromosome, complete genomebeta-lactamase3e-0962.8
NC_013169:1058463:1061306106130610625861281Kytococcus sedentarius DSM 20547, complete genomepenicillin-binding protein, beta-lactamase class C6e-0961.6
NC_020126:6019850:6033705603370560351741470Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase7e-0961.6
NC_017186:3947874:3965203396520339662941092Amycolatopsis mediterranei S699 chromosome, complete genomebeta-lactamase class C1e-0860.8
NC_014318:3947845:3965174396517439662651092Amycolatopsis mediterranei U32 chromosome, complete genomebeta-lactamase class C1e-0860.8
NC_013757:2630000:2641547264154726427971251Geodermatophilus obscurus DSM 43160, complete genomebeta-lactamase2e-0860.1
NC_009380:2310000:2315040231504023163051266Salinispora tropica CNB-440 chromosome, complete genomeSerine-type D-Ala-D-Ala carboxypeptidase2e-0859.7
NC_020126:6019850:6035252603525260367211470Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase7e-0858.5
NC_016935:4117485:4190913419091341920641152Paenibacillus mucilaginosus 3016 chromosome, complete genomealkaline D-peptidase1e-0757.4
NC_013947:3534209:3552144355214435533941251Stackebrandtia nassauensis DSM 44728 chromosome, complete genomebeta-lactamase2e-0756.6
NC_019673:189487:2064942064942076901197Saccharothrix espanaensis DSM 44229 complete genomeAlkaline D-peptidase4e-0755.8
NC_015690:4361000:4424844442484444259951152Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAlkaline D-peptidase and alkaline D-peptidase fusion4e-0755.8
NC_016609:4834378:4858265485826548595931329Niastella koreensis GR20-10 chromosome, complete genomebeta-lactamase6e-0755.1
NC_015957:7348269:7376981737698173782641284Streptomyces violaceusniger Tu 4113 chromosome, complete genomebeta-lactamase2e-0653.1
NC_000962:475816:4773274773274785561230Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE CONSERVED LIPOPROTEIN LPQK5e-0652
NC_017026:476500:4776274776274788561230Mycobacterium tuberculosis RGTB327 chromosome, complete genomelipoprotein5e-0652
NC_016768:476500:4775864775864788151230Mycobacterium tuberculosis KZN 4207 chromosome, complete genomelipoprotein LpqK6e-0652
NC_012943:476500:4775864775864788151230Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein6e-0652
NC_008536:3160540:3184645318464531858501206Solibacter usitatus Ellin6076, complete genomebeta-lactamase6e-0652
NC_009565:479500:4804974804974817261230Mycobacterium tuberculosis F11, complete genomelipoprotein lpqK5e-0652
NC_002755:472872:4774184774184786471230Mycobacterium tuberculosis CDC1551, complete genomelipoprotein, putative5e-0652
NC_012207:477500:4784754784754797041230Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative lipoprotein5e-0652
NC_009525:477093:4786374786374798661230Mycobacterium tuberculosis H37Ra, complete genomeputative conserved lipoprotein LpqK5e-0652
NC_008769:507000:5081425081425093711230Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative lipoprotein lpqK5e-0652
NC_002945:476835:4783464783464795751230Mycobacterium bovis AF2122/97, complete genomelipoprotein LpqK5e-0652
NC_016804:477500:4784764784764797051230Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative lipoprotein5e-0652
NC_019950:481881:4836654836654848941230Mycobacterium canettii CIPT 140060008 complete genomeConserved lipoprotein of unknown function, lipoprotein LpqK9e-0651.2
NC_015848:483500:4846164846164858451230Mycobacterium canettii CIPT 140010059, complete genomeputative lipoprotein LPQK9e-0651.2