Pre_GI: BLASTP Hits

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Query: NC_012660:3573154:3578198 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3578198, End: 3578647, Length: 450

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:1551939:157089915708991571333435Synechococcus elongatus PCC 6301, complete genomea part of pilin polypeptide PilA3e-0753.9
NC_006576:1551939:157152215715221571956435Synechococcus elongatus PCC 6301, complete genomea part of pilin polypeptide PilA3e-0753.9
NC_010501:4989455:500772050077205008130411Pseudomonas putida W619, complete genomeFimbrial protein pilin3e-0650.8
NC_009256:2945059:296758429675842968042459Burkholderia vietnamiensis G4 chromosome 1, complete sequencefimbrial protein pilin6e-0753.1
NC_015733:715947:718863718863719273411Pseudomonas putida S16 chromosome, complete genomefimbrial protein pilin7e-0649.7
NC_004088:3505383:352055535205553520992438Yersinia pestis KIM, complete genomegeneral protein secretion protein8e-27119
NC_011884:732000:751037751037751504468Cyanothece sp. PCC 7425, complete genomegeneral secretion pathway protein6e-0753.1
NC_014836:33278:557365573656197462Desulfurispirillum indicum S5 chromosome, complete genomegeneral secretion pathway protein G3e-37153
NC_011663:180889:182175182175182609435Shewanella baltica OS223 chromosome, complete genomegeneral secretion pathway protein G8e-32135
NC_015061:366552:370755370755371210456Rahnella sp. Y9602 chromosome, complete genomegeneral secretion pathway protein G7e-28122
NC_017168:199381:214306214306214743438Yersinia pestis A1122 chromosome, complete genomegeneral secretion pathway protein G8e-27119
NC_009708:1131500:114644711464471146884438Yersinia pseudotuberculosis IP 31758 chromosome, complete genomegeneral secretion pathway protein G8e-27119
NC_005810:3142384:315843931584393158876438Yersinia pestis biovar Microtus str. 91001, complete genomegeneral secretion pathway protein G8e-27119
NC_006155:3596120:361129636112963611733438Yersinia pseudotuberculosis IP 32953, complete genomegeneral secretion pathway protein G8e-27119
NC_008800:3642679:365805836580583658507450Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,general secretion pathway protein G1e-26118
NC_012912:3749156:376507137650713765487417Dickeya zeae Ech1591, complete genomegeneral secretion pathway protein G2e-25114
NC_014207:500373:505051505051505491441Methylotenera sp. 301 chromosome, complete genomegeneral secretion pathway protein G1e-23108
NC_012811:227541:260994260994261482489Methylobacterium extorquens AM1 megaplasmid, complete sequenceGeneral secretion pathway protein G1e-1788.6
NC_017277:1283477:129519912951991295711513Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G2e-1064.7
NC_000911:1284552:129699312969931297499507Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G3e-0960.8
NC_003272:637970:657224657224657847624Nostoc sp. PCC 7120, complete genomegeneral secretion pathway protein G2e-0651.6
NC_015581:1133775:115115911511591151596438Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomegeneral secretion pathway protein G1e-40165
NC_017047:370837:373409373409373864456Rahnella aquatilis HX2 chromosome, complete genomegeneral secretion pathway protein G7e-28122
NC_017265:1000342:101639410163941016831438Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,general secretion pathway protein G8e-27119
NC_014029:1146900:116294911629491163386438Yersinia pestis Z176003 chromosome, complete genomegeneral secretion pathway protein G8e-27119
NC_010159:3448490:346469434646943465131438Yersinia pestis Angola, complete genomegeneral secretion pathway protein G8e-27119
NC_021150:1564229:159337615933761593813438Azotobacter vinelandii CA6, complete genomeGeneral secretion pathway protein G3e-26117
NC_013851:3392644:339968233996823400110429Allochromatium vinosum DSM 180 chromosome, complete genomegeneral secretion pathway protein G7e-24109
NC_020064:3998715:405600040560004056440441Serratia marcescens FGI94, complete genomegeneral secretion pathway protein G2e-22104
NC_008358:2638245:265836226583622658817456Hyphomonas neptunium ATCC 15444, complete genomegeneral secretion pathway protein G5e-1993.2
NC_000911:1284552:129638212963821296894513Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G2e-1064.7
NC_017039:1283732:129606512960651296571507Synechocystis sp. PCC 6803 substr. PCC-P, complete genomegeneral secretion pathway protein G3e-0960.8
NC_016818:362548:378504378504378959456Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completegeneral secretion pathway protein G4e-28123
NC_015138:4584846:460377246037724604227456Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completegeneral secretion pathway protein G5e-27119
NC_017154:1089044:110509311050931105530438Yersinia pestis D106004 chromosome, complete genomegeneral secretion pathway protein G8e-27119
NC_010465:1118147:113490511349051135342438Yersinia pseudotuberculosis YPIII, complete genomegeneral secretion pathway protein G8e-27119
NC_003143:875367:890531890531890968438Yersinia pestis CO92, complete genomegeneral secretion pathway protein G8e-27119
NC_008149:3373229:338839333883933388830438Yersinia pestis Nepal516, complete genomegeneral secretion pathway protein G8e-27119
NC_012560:1564500:159336315933631593800438Azotobacter vinelandii DJ, complete genomeGeneral secretion pathway protein G3e-26117
NC_013960:452493:453741453741454175435Nitrosococcus halophilus Nc4 chromosome, complete genomegeneral secretion pathway protein G1e-1995.1
NC_015224:1067390:108429110842911084644354Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,general secretion pathway protein G1e-1582
NC_017039:1283732:129545412954541295966513Synechocystis sp. PCC 6803 substr. PCC-P, complete genomegeneral secretion pathway protein G2e-1064.7
NC_017052:1283720:129605312960531296559507Synechocystis sp. PCC 6803 substr. PCC-N, complete genomegeneral secretion pathway protein G3e-0960.8
NC_007492:3655545:366053536605353660993459Pseudomonas fluorescens PfO-1, complete genomeGeneral secretion pathway protein G6e-72268
NC_016612:2902628:293945429394542939882429Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein G8e-29125
NC_008752:4589119:461104446110444611499456Acidovorax avenae subsp. citrulli AAC00-1, complete genomegeneral secretion pathway protein G4e-27120
NC_017160:1092839:110776611077661108203438Yersinia pestis D182038 chromosome, complete genomegeneral secretion pathway protein G8e-27119
NC_009381:775357:790281790281790718438Yersinia pestis Pestoides F chromosome, complete genomegeneral secretion pathway protein G8e-27119
NC_010634:3509880:352505635250563525493438Yersinia pseudotuberculosis PB1/+, complete genomegeneral secretion pathway protein G8e-27119
NC_008150:513783:529832529832530269438Yersinia pestis Antiqua, complete genomegeneral secretion pathway protein G8e-27119
NC_010002:1447711:144771114477111448151441Delftia acidovorans SPH-1, complete genomegeneral secretion pathway protein G2e-26118
NC_014762:1204584:122748212274821227913432Sulfuricurvum kujiense DSM 16994 chromosome, complete genomegeneral secretion pathway protein g7e-25112
NC_015500:1557772:156203615620361562473438Treponema brennaborense DSM 12168 chromosome, complete genomegeneral secretion pathway protein G1e-21102
NC_017052:1283720:129544212954421295954513Synechocystis sp. PCC 6803 substr. PCC-N, complete genomegeneral secretion pathway protein G2e-1064.7
NC_017277:1283477:129581012958101296316507Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G3e-0960.8
NC_011742:3277941:329816532981653298647483Escherichia coli S88 chromosome, complete genomegeneral secretion pathway protein G precursor (epsG-like)2e-35147
NC_010498:3291344:331492933149293315384456Escherichia coli SMS-3-5, complete genomegeneral secretion pathway protein GspG2e-35147
NC_018691:2410779:243262024326202433051432Alcanivorax dieselolei B5 chromosome, complete genomeGeneral secretion pathway protein GspG2e-34144
NC_009925:6097000:610343861034386103917480Acaryochloris marina MBIC11017, complete genomegeneral secretion pathway protein, putative2e-0651.6
NC_015499:309394:323117323117323515399Thermodesulfobium narugense DSM 14796 chromosome, complete genomehypothetical protein3e-0650.4
NC_014958:2614399:262671726267172627136420Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein2e-0651.6
NC_009437:1189432:119357211935721193988417Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehypothetical protein3e-0754.3
NC_008253:3161311:320159732015973202052456Escherichia coli 536, complete genomehypothetical type II secretion protein3e-35147
NC_007946:3289151:331046633104663310921456Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspG2e-35147
NC_007517:2055305:207021820702182070640423Geobacter metallireducens GS-15, complete genomeN-terminal methylation5e-0753.5
NC_009481:1638394:164415016441501644614465Synechococcus sp. WH 7803 chromosome, complete genomepili subunit superfamily protein9e-0855.8
NC_007604:41495:495504955049984435Synechococcus elongatus PCC 7942, complete genomepilin polypeptide PilA-like4e-0857
NC_007604:41495:489274892749361435Synechococcus elongatus PCC 7942, complete genomepilin polypeptide PilA-like3e-0753.9
NC_014958:2614399:262620026262002626643444Deinococcus maricopensis DSM 21211 chromosome, complete genomepilin V1e-0652
NC_008781:3056407:306411630641163064682567Polaromonas naphthalenivorans CJ2, complete genomepilus assembly protein1e-0652
NC_008820:1818695:184166318416631842142480Prochlorococcus marinus str. MIT 9303, complete genomepossible pilin6e-1063.2
NC_008319:615135:624640624640625146507Synechococcus sp. CC9311, complete genomepossible pilin3e-0857.4
NC_008319:615135:631334631334631888555Synechococcus sp. CC9311, complete genomepossible pilin3e-0753.9
NC_013521:1976331:198460819846081985015408Sanguibacter keddieii DSM 10542, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein6e-0753.1
NC_019978:1816940:181963618196361820067432Halobacteroides halobius DSM 5150, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein5e-0960.1
NC_003296:556836:584868584868585302435Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE GENERAL SECRETION PATHWAY GSPG-RELATED TRANSMEMBRANE PROTEIN1e-21102
NC_003296:168506:171388171388171822435Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE GENERAL SECRETION PATHWAY GSPG-RELATED TRANSMEMBRANE PROTEIN1e-24111
NC_008027:2397255:241184224118422412288447Pseudomonas entomophila L48, complete genomeProbable type II secretion pathway protein G, transport across outer membrane8e-56215
NC_015677:1282865:130725913072591307711453Ramlibacter tataouinensis TTB310 chromosome, complete genomepseudopilin, general secretion pathway protein G2e-22104
NC_011750:3584000:360449636044963604978483Escherichia coli IAI39 chromosome, complete genomeputative general secretion pathway protein G (epsG-like)3e-35147
NC_011751:3530954:355660235566023557084483Escherichia coli UMN026 chromosome, complete genomeputative general secretion pathway protein G (epsG-like)3e-35147
NC_011745:3511600:353097535309753531457483Escherichia coli ED1a chromosome, complete genomeputative general secretion pathway protein G (epsG-like)3e-35147
NC_011740:2986514:298772729877272988209483Escherichia fergusonii ATCC 35469, complete genomeputative general secretion pathway protein G precursor (epsG-like)6e-35145
NC_003295:2507850:251081925108192511286468Ralstonia solanacearum GMI1000, complete genomePUTATIVE GSPG-RELATED TRANSMEMBRANE PROTEIN1e-26118
NC_008563:3362058:338337333833733383828456Escherichia coli APEC O1, complete genomeputative type II secretion protein GspG2e-35147
NC_009348:1475955:148962414896241490055432Aeromonas salmonicida subsp. salmonicida A449, complete genomeS-protein secretion component G2e-1684.3
NC_008260:497855:509301509301509750450Alcanivorax borkumensis SK2, complete genomesecretion protein, putative4e-0857
NC_010644:231486:233362233362233853492Elusimicrobium minutum Pei191, complete genomeTfp pilus assembly protein PilE-like protein4e-0857
NC_014654:1581689:158168915816891582123435Halanaerobium sp. 'sapolanicus' chromosome, complete genomeTfp pilus assembly protein, major pilin PilA3e-1167.4
NC_012967:3012317:303374630337463034201456Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein GspG3e-35147
NC_014733:1073540:107600010760001076434435Methylovorus sp. MP688 chromosome, complete genometype II secretion system protein g2e-0755.1
NC_014207:500373:513842513842514249408Methylotenera sp. 301 chromosome, complete genometype II secretion system protein G2e-0651.6
NC_009074:2117500:213571821357182136344627Burkholderia pseudomallei 668 chromosome I, complete sequenceType II secretory pathway, pseudopilin PulG4e-23107
NC_006834:3422985:343006334300633430518456Xanthomonas oryzae pv. oryzae KACC10331, complete genometype IV pilin7e-0752.8
NC_017267:2955946:296392029639202964375456Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype IV pilin2e-0651.6
NC_014355:3398033:342452534245253425052528Candidatus Nitrospira defluvii, complete genometype IV pilin PilA2e-0754.3
NC_009656:5297000:530881553088155309354540Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilin structural subunit3e-0650.8