Pre_GI: BLASTP Hits

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Query: NC_012660:3320330:3335293 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3335293, End: 3336165, Length: 873

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1885613:193009619300961930971876Pseudomonas putida ND6 chromosome, complete genometranscriptional regulator-like protein2e-119428
NC_009512:5166459:518413251841325185007876Pseudomonas putida F1, complete genometranscriptional regulator-like protein2e-119428
NC_010322:5293652:532328153232815324156876Pseudomonas putida GB-1 chromosome, complete genometranscriptional regulator2e-119428
NC_009434:3611738:373763837376383738405768Pseudomonas stutzeri A1501, complete genomehypothetical protein3e-115414
NC_015740:3631326:365297736529773653804828Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-109395
NC_005139:2201820:223301622330162233879864Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein7e-76284
NC_002505:1892430:192188519218851922745861Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein5e-74277
NC_009457:1444449:147498814749881475848861Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein5e-74277
NC_012578:1838470:186901818690181869878861Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein5e-74277
NC_012582:1976962:200640720064072007267861Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein5e-74277
NC_012668:1688500:172476317247631725623861Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-74277
NC_016445:1363831:139328513932851394145861Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein5e-74277
NC_016944:1937645:196819319681931969053861Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein5e-74277
NC_009656:6224221:624993162499316250773843Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-73275
NC_018691:3437821:345500234550023455898897Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein3e-73275
NC_009901:1516340:153236015323601533223864Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein3e-72271
NC_016613:2139276:214296521429652143819855Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein7e-72270
NC_005139:2201820:226343722634372264276840Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-62238
NC_007481:3167434:318037231803723181232861Pseudoalteromonas haloplanktis TAC125 chromosome I, completehypothetical protein2e-61235
NC_010995:2798000:281061628106162811452837Cellvibrio japonicus Ueda107, complete genomehypothetical protein3e-60232
NC_008577:2511326:251397125139712514882912Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-57223
NC_015740:3678342:370449037044903705359870Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein6e-52204
NC_010404:55908:684116841169292882Acinetobacter baumannii plasmid p3ABAYE, complete sequencehypothetical protein2e-47189
NC_012912:1053618:106182510618251062664840Dickeya zeae Ech1591, complete genomehypothetical protein6e-45181
NC_009049:1934398:194163519416351942522888Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencehypothetical protein4e-39162
NC_015259:485015:545307545307546179873Polymorphum gilvum SL003B-26A1 chromosome, complete genomePredicted transcriptional regulator8e-39160
NC_008686:1472899:149974814997481500635888Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein3e-38158
NC_010814:243384:255976255976256827852Geobacter lovleyi SZ, complete genomehypothetical protein2e-37156
NC_009429:622359:643046643046643918873Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein3e-37155
NC_012880:1127997:112993011299301130835906Dickeya dadantii Ech703, complete genomehypothetical protein5e-37154
NC_010725:3315007:333208333320833332931849Methylobacterium populi BJ001, complete genomehypothetical protein3e-36152
NC_014910:4316706:432672643267264327589864Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-35149
NC_010002:3002354:301242130124213013323903Delftia acidovorans SPH-1, complete genomehypothetical protein6e-35148
NC_020409:2222000:223504422350442235865822Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-33143
NC_008686:2080770:208452320845232085431909Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein2e-33143
NC_007794:2304768:232027623202762321145870Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein3e-33142
NC_017075:1837966:185807818580781859037960Rubrivivax gelatinosus IL144, complete genomehypothetical protein5e-33141
NC_015259:734795:746799746799747677879Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator2e-32139
NC_010943:2499092:250523425052342506181948Stenotrophomonas maltophilia K279a, complete genomehypothetical protein2e-32139
NC_011283:2836000:288569128856912886545855Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-32138
NC_009434:608765:668716668716669672957Pseudomonas stutzeri A1501, complete genometranscriptional regulator9e-32137
NC_014414:1140357:1168240116824011692441005Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein3e-30132
NC_009720:750612:764693764693765556864Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-29130
NC_007509:3668:215102151022316807Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein4e-28125
NC_003919:4618988:464463946446394645520882Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein7e-28124
NC_007086:2887875:294430529443052945219915Xanthomonas campestris pv. campestris str. 8004, complete genomePredicted transcriptional regulator4e-27122
NC_008740:443274:479134479134480018885Marinobacter aquaeolei VT8, complete genomehypothetical protein4e-24112
NC_011662:317831:328451328451329338888Thauera sp. MZ1T, complete genomehypothetical protein1e-23110
NC_015663:2090442:209594320959432096836894Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-22105
NC_018691:3496420:350707235070723507902831Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator5e-22105
NC_016445:89500:109548109548110468921Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-21103
NC_010554:2646806:272159627215962722519924Proteus mirabilis HI4320, complete genomeplasmid-related protein3e-21102
NC_015422:910292:923884923884924774891Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein6e-21101
NC_011770:2499432:252217325221732523087915Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator-like3e-1995.9
NC_004757:2730057:275170227517022752607906Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein4e-1995.5
NC_008700:2451798:246686324668632467735873Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein6e-1994.7
NC_015379:908904:938894938894939808915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-1994.7
NC_008786:2729635:273526227352622736161900Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein8e-1994.4
NC_010170:4463000:448229344822934483201909Bordetella petrii, complete genomehypothetical protein1e-1893.6
NC_010002:4572573:461159546115954612503909Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1893.6
NC_007498:134442:150751150751151689939Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein2e-1893.2
NC_010170:4409683:441923244192324420140909Bordetella petrii, complete genomehypothetical protein2e-1892.8
NC_004757:2730057:274742827474282748342915Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein4e-1892
NC_011992:3375929:339429333942933395210918Acidovorax ebreus TPSY, complete genomehypothetical protein5e-1891.7
NC_004431:5123325:512660351266035127508906Escherichia coli CFT073, complete genomehypothetical protein2e-1790.1
NC_007651:72952:130914130914131828915Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-1789.7
NC_015740:2407500:243613724361372437057921Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-1789.7
NC_010512:1015557:103454010345401035481942Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein3e-1789.4
NC_008322:2077628:209912820991282100009882Shewanella sp. MR-7, complete genomehypothetical protein2e-1686.3
NC_012691:2476223:249694124969412497831891Tolumonas auensis DSM 9187, complete genomehypothetical protein5e-1685.1
NC_007651:1620000:162983716298371630751915Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1583.6
NC_015740:3631326:365632136563213656479159Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-1478.6
NC_015572:1:311393113931831693Methylomonas methanica MC09 chromosome, complete genomehypothetical protein3e-1375.9
NC_008577:2604281:263014126301412631034894Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein7e-1374.7
NC_004459:3243987:326094132609413261654714Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator1e-1273.9
NC_020260:3931567:394095539409553941821867Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-1272
NC_013166:32474:480674806748936870Kangiella koreensis DSM 16069, complete genomehypothetical protein4e-0962