Pre_GI: BLASTP Hits

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Query: NC_012660:2684981:2690401 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2690401, End: 2691093, Length: 693

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015572:65597:833358333584147813Methylomonas methanica MC09 chromosome, complete genomeNUDIX hydrolase6e-25114
NC_011662:386162:390433390433391191759Thauera sp. MZ1T, complete genomeNUDIX hydrolase1e-24113
NC_005966:923008:948144948144948896753Acinetobacter sp. ADP1, complete genomeconserved hypothetical protein; putative MutT/nudix family protein3e-21102
NC_012811:959725:975383975383976081699Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein5e-21101
NC_008025:1588348:160423516042351604912678Deinococcus geothermalis DSM 11300, complete genomeNUDIX hydrolase2e-1582.8
NC_013440:8717500:873205987320598732748690Haliangium ochraceum DSM 14365, complete genomeNUDIX hydrolase6e-1477.8
NC_006361:4574536:458319845831984583914717Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-1376.6
NC_011884:1998559:201802520180252018714690Cyanothece sp. PCC 7425, complete genomeNUDIX hydrolase2e-1376.3
NC_005085:24623:400464004640807762Chromobacterium violaceum ATCC 12472, complete genomeprobable MutT/nudix family protein2e-1375.9
NC_008095:8772893:877578687757868776475690Myxococcus xanthus DK 1622, complete genomehydrolase, NUDIX family8e-1373.9
NC_007777:1296000:131113113111311311880750Frankia sp. CcI3, complete genomeNUDIX hydrolase2e-1169.3
NC_013406:7024149:704634070463407047224885Paenibacillus sp. Y412MC10 chromosome, complete genomeNUDIX hydrolase5e-1167.8
NC_009953:2342500:235882923588292359557729Salinispora arenicola CNS-205 chromosome, complete genomeNUDIX hydrolase7e-1167.4
NC_009380:4944183:494560249456024946342741Salinispora tropica CNB-440 chromosome, complete genomeNUDIX hydrolase2e-1065.9
NC_013595:8338619:835783483578348358547714Streptosporangium roseum DSM 43021, complete genomeNUDIX hydrolase4e-0961.6
NC_008146:861319:922395922395923048654Mycobacterium sp. MCS, complete genomeNUDIX hydrolase6e-0857.8
NC_008705:868623:931124931124931777654Mycobacterium sp. KMS, complete genomeNUDIX hydrolase6e-0857.8
NC_008054:272801:276018276018276794777Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative hydrolase (NUDIX family)1e-0756.6
NC_008529:264000:272030272030272806777Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeADP-ribose pyrophosphatase1e-0756.6
NC_016627:1133759:114851711485171149431915Clostridium clariflavum DSM 19732 chromosome, complete genomeADP-ribose pyrophosphatase2e-0755.8
NC_017955:4075804:4088990408899040900841095Modestobacter marinus, complete genomeNUDIX hydrolase8e-0753.9
NC_012883:1283529:128434612843461284897552Thermococcus sibiricus MM 739, complete genomeADP-ribose pyrophosphatase2e-0652.8