Pre_GI: BLASTP Hits

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Query: NC_012660:2684981:2688291 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2688291, End: 2689601, Length: 1311

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:2051821:2072028207202820733381311Pseudomonas entomophila L48, complete genomemannitol ABC transporter, periplasmic mannitol-binding protein0683
NC_007492:2994036:3021803302180330231131311Pseudomonas fluorescens PfO-1, complete genomeextracellular solute-binding protein, family 10674
NC_014532:1713987:1728058172805817293681311Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein2e-144512
NC_015137:2616222:2639997263999726413341338Burkholderia sp. CCGE1001 chromosome 2, complete sequencefamily 1 extracellular solute-binding protein1e-142506
NC_015856:1271295:1289565128956512909831419Collimonas fungivorans Ter331 chromosome, complete genomeABC sugar transporter, periplasmic ligand binding protein7e-137487
NC_014010:1020488:1020488102048810217921305Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeperiplasmic sorbitol-binding protein, putative3e-131468
NC_010524:933191:9517829517829530891308Leptothrix cholodnii SP-6, complete genomeextracellular solute-binding protein family 12e-129462
NC_018644:516157:5259355259355272391305Alpha proteobacterium HIMB59 chromosome, complete genomeextracellular solute-binding protein3e-128458
NC_014221:3137952:3147241314724131485541314Truepera radiovictrix DSM 17093 chromosome, complete genomeextracellular solute-binding protein family 12e-112406
NC_015145:1045264:1078367107836710797191353Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family2e-87323
NC_008149:2517538:2520200252020025214681269Yersinia pestis Nepal516, complete genomeexported solute-binding protein1e-33144
NC_008010:200796:2067502067502080361287Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceextracellular solute-binding protein, family 15e-27122
NC_014212:3091571:3099872309987231012211350Meiothermus silvanus DSM 9946 chromosome, complete genomeextracellular solute-binding protein family 12e-20100
NC_004463:1992000:2042312204231220436971386Bradyrhizobium japonicum USDA 110, complete genomeABC transporter substrate-binding protein5e-1892.4
NC_009952:526456:5340715340715354141344Dinoroseobacter shibae DFL 12, complete genomeABC-type sugar / sn-glycerol 3-phosphate transport protein8e-1788.6
NC_016641:1984206:1986876198687619881261251Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein2e-1687.4
NC_015138:4666544:4687186468718646885231338Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 1 extracellular solute-binding protein2e-1687.4
NC_014650:2500817:2511401251140125128101410Geobacillus sp. Y4.1MC1 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1686.7
NC_014364:2246524:2258344225834422596421299Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 16e-1685.5
NC_016641:4011000:4028112402811240294521341Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1685.1
NC_013850:4829455:4856074485607448573841311Klebsiella variicola At-22 chromosome, complete genomeextracellular solute-binding protein family 11e-1584.7
NC_011283:5011497:5033154503315450344641311Klebsiella pneumoniae 342 chromosome, complete genomeABC transporter substrate-binding protein1e-1584.7
NC_011899:86800:9030190301915361236Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 12e-1480.9
NC_013592:713036:7527397527397540611323Dickeya dadantii Ech586, complete genomeextracellular solute-binding protein family 12e-1480.9
NC_015690:2039215:2052584205258420539121329Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein2e-1377.8
NC_016860:4024000:4046385404638540476951311Salmonella enterica subsp. enterica serovar Typhimurium strglycerol-3-phosphate-binding periplasmic protein3e-1377
NC_012912:3853377:3854455385445538557771323Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 15e-1375.9
NC_016935:2567039:2601872260187226032001329Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein1e-1275.1
NC_013642:942767:9427679427679440771311Thermotoga naphthophila RKU-10, complete genomeextracellular solute-binding protein family 11e-1274.7
NC_020291:6310000:6326586632658663278271242Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeABC-type sugar transport system, periplasmic component2e-1274.3
NC_008095:8890464:8911123891112389124031281Myxococcus xanthus DK 1622, complete genomeputative sugar ABC transporter, periplasmic sugar-binding protein5e-1272.8
NC_007516:1323105:1323105132310513243701266Synechococcus sp. CC9605, complete genomeABC transporter, likely sugar solute binding protein7e-1272.4
NC_009828:1474970:1491131149113114924261296Thermotoga lettingae TMO, complete genomeextracellular solute-binding protein family 11e-1171.2
NC_014844:659829:7003187003187016251308Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1170.9
NC_014915:2149884:2155118215511821564311314Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 13e-1170.1
NC_013411:3010000:3015187301518730165001314Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 13e-1170.1
NC_008699:3896816:3905693390569339069911299Nocardioides sp. JS614, complete genomeextracellular solute-binding protein, family 14e-1169.7
NC_012880:3827390:3830190383019038314971308Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 15e-1169.3
NC_014364:815346:8314538314538327631311Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 16e-1169.3
NC_021171:608315:6135026135026149261425Bacillus sp. 1NLA3E, complete genomefamily 1 extracellular solute-binding protein9e-1168.6
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein9e-1168.6
NC_010003:123297:1403661403661416041239Petrotoga mobilis SJ95, complete genomeextracellular solute-binding protein family 11e-1067.8
NC_009485:8187321:8204763820476382062231461Bradyrhizobium sp. BTAi1 chromosome, complete genomesugar ABC transporter periplasmic protein1e-1067.8
NC_021182:966839:9705849705849718611278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component4e-1066.6
NC_009443:142500:1541291541291555561428Streptococcus suis 98HAH33, complete genomesugar ABC transporter periplasmic protein1e-0965.1
NC_012925:140000:1545701545701558441275Streptococcus suis P1/7, complete genomeextracellular solute-binding lipoprotein1e-0965.1
NC_012924:142500:1543751543751556491275Streptococcus suis SC84, complete genomeextracellular solute-binding lipoprotein1e-0965.1
NC_012926:140000:1543541543541556281275Streptococcus suis BM407 chromosome, complete genomeextracellular solute-binding lipoprotein1e-0965.1
NC_020126:10117469:1013385310133853101351331281Myxococcus stipitatus DSM 14675, complete genomeputative sugar ABC transporter periplasmic sugar-binding protein1e-0964.7
NC_009481:1109324:1125005112500511262851281Synechococcus sp. WH 7803 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0963.9
NC_009921:8549757:8603053860305386043721320Frankia sp. EAN1pec, complete genomeextracellular solute-binding protein family 13e-0963.5
NC_013656:2317224:2320566232056623218101245Lactococcus lactis subsp. lactis KF147, complete genomesugar ABC transporter sugar-binding protein4e-0963.2
NC_021171:4549673:4550795455079545520691275Bacillus sp. 1NLA3E, complete genomeextracellular solute-binding protein3e-0963.2
NC_017079:4550406:4558150455815045595291380Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ABC transporter substrate binding protein7e-0962.4
NC_015520:2859820:2864204286420428655201317Mahella australiensis 50-1 BON chromosome, complete genomefamily 1 extracellular solute-binding protein7e-0962
NC_010572:2843589:2863797286379728650441248Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter substrate-binding protein8e-0962
NC_014721:373607:3913783913783926041227Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeextracellular solute-binding protein family 12e-0860.8
NC_015949:2101302:2106691210669121079171227Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0860.8
NC_011769:787496:7908717908717921661296Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeextracellular solute-binding protein family 12e-0860.8
NC_008319:1272251:1281709128170912829981290Synechococcus sp. CC9311, complete genomeABC transporter for sugars, solute-binding protein3e-0860.1
NC_014829:4088494:4107683410768341090171335Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 13e-0860.1
NC_006087:237500:2634602634602646291170Leifsonia xyli subsp. xyli str. CTCB07, complete genomemaltose/trehalose porter5e-0859.7
NC_013517:773280:7751637751637764041242Sebaldella termitidis ATCC 33386, complete genomeextracellular solute-binding protein family 16e-0859.3
NC_020210:1951746:1962799196279919641211323Geobacillus sp. GHH01, complete genomeExtracellular solute-binding protein family 11e-0758.5
NC_017079:1084684:1100260110026011014951236Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ABC transporter substrate binding protein2e-0757.8
NC_015690:7785875:7785875778587577872091335Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0757.8
NC_014364:815346:8385568385568398301275Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-0757.4
NC_015848:3175692:3197808319780831991181311Mycobacterium canettii CIPT 140010059, complete genomeputative Sn-glycerol-3-phosphate-binding lipoprotein UGPB3e-0757
NC_012034:438000:4587584587584599841227Anaerocellum thermophilum DSM 6725, complete genomeextracellular solute-binding protein family 13e-0757
NC_014652:2323598:2330356233035623315821227Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 14e-0756.6
NC_008786:2573558:2583576258357625849221347Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 17e-0755.8
NC_012491:6143928:6148872614887261501701299Brevibacillus brevis NBRC 100599, complete genomeprobable ABC transporter substrate binding protein8e-0755.5
NC_016641:4653889:4671448467144846727221275Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein8e-0755.5
NC_017218:31247:4968249682510551374Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein8e-0755.5
NC_019950:3139865:3162191316219131635011311Mycobacterium canettii CIPT 140060008 complete genomePutative Sn-glycerol-3-phosphate-binding lipoprotein UgpB9e-0755.1
NC_014169:2353711:2365681236568123670451365Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 1 extracellular solute-binding protein1e-0655.1
NC_012669:4118230:4129844412984441311091266Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 12e-0654.7
NC_013729:4871430:4871430487143048727161287Kribbella flavida DSM 17836, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_016516:1751336:1753605175360517549181314Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeextracellular solute-binding protein1e-0654.7
NC_014392:412916:4339374339374351631227Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_013526:439813:4495644495644510061443Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_014720:2420455:2437885243788524391111227Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 12e-0654.3
NC_014364:1899983:1918380191838019196721293Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-0653.9
NC_009442:142500:154225154225155079855Streptococcus suis 05ZYH33 chromosome, complete genomesugar ABC transporter periplasmic protein3e-0653.5
NC_018531:3983925:3983925398392539852351311Arthrobacter sp. Rue61a chromosome, complete genomeABC transporter-binding protein3e-0653.5
NC_014217:4550544:4569596456959645709001305Starkeya novella DSM 506 chromosome, complete genomeextracellular solute-binding protein family 14e-0653.1
NC_009437:475817:4947954947954960211227Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular solute-binding protein5e-0652.8
NC_008380:4078670:4078670407867040801481479Rhizobium leguminosarum bv. viciae 3841, complete genomeputative solute-binding component of ABC transporter5e-0652.8
NC_013642:942767:9781219781219795451425Thermotoga naphthophila RKU-10, complete genomeextracellular solute-binding protein family 15e-0652.8
NC_015577:1462874:1468358146835814696891332Treponema azotonutricium ZAS-9 chromosome, complete genomeputative family 1 extracellular solute-binding protein6e-0652.8