Pre_GI: BLASTP Hits

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Query: NC_012660:2431803:2445866 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2445866, End: 2446327, Length: 462

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015593:158107:1988931988931999961104Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeAlpha-methylacyl-CoA racemase1e-33141
NC_016582:10227196:1026957110269571102707761206Streptomyces bingchenggensis BCW-1 chromosome, complete genomeL-carnitine dehydratase/bile acid-inducible protein F2e-28124
NC_007974:2097334:2124495212449521256311137Ralstonia metallidurans CH34 chromosome 2, complete sequenceL-carnitine dehydratase/bile acid-inducible protein F2e-27120
NC_008595:1869284:188604218860421886950909Mycobacterium avium 104, complete genomeMcr protein4e-27120
NC_009511:1781914:1787787178778717889051119Sphingomonas wittichii RW1 chromosome, complete genomeL-carnitine dehydratase/bile acid-inducible protein F5e-27119
NC_016948:3023940:3028172302817230291761005Mycobacterium intracellulare MOTT-64 chromosome, complete genomemcr protein5e-26116
NC_009445:7220929:7246637724663772477491113Bradyrhizobium sp. ORS 278 chromosome, complete genomealpha-methylacyl-CoA racemase3e-25114
NC_008786:492363:4923634923634935171155Verminephrobacter eiseniae EF01-2, complete genomeL-carnitine dehydratase/bile acid-inducible protein F6e-25113
NC_017904:1763015:1783973178397317850881116Mycobacterium sp. MOTT36Y chromosome, complete genomeL-carnitine dehydratase/bile acid-inducible protein F1e-24111
NC_007974:2097334:2134587213458721357081122Ralstonia metallidurans CH34 chromosome 2, complete sequenceL-carnitine dehydratase/bile acid-inducible protein F3e-24110
NC_007974:2097334:2156859215685921579681110Ralstonia metallidurans CH34 chromosome 2, complete sequenceL-carnitine dehydratase/bile acid-inducible protein F4e-24110
NC_009921:3455783:3469285346928534704481164Frankia sp. EAN1pec, complete genomeL-carnitine dehydratase/bile acid-inducible protein F7e-24109
NC_008595:2687245:269059926905992691579981Mycobacterium avium 104, complete genomefatty acid-CoA racemase2e-23108
NC_016147:1788219:1807209180720918083181110Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative acyl-CoA transferase/carnitine dehydratase1e-23108
NC_011887:110618:1247271247271258961170Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeL-carnitine dehydratase/bile acid-inducible protein F3e-21100
NC_007722:2172000:218038321803832181069687Erythrobacter litoralis HTCC2594, complete genomealpha-methylacyl-CoA racemase4e-21100
NC_007333:430000:4448724448724459901119Thermobifida fusca YX, complete genomeputative fatty acid-CoA racemase4e-2097.1
NC_020133:4889034:4908917490891749100141098Mycobacterium liflandii 128FXT, complete genomealpha-methylacyl-CoA racemase Mcr7e-2096.3
NC_010397:815549:8395848395848406751092Mycobacterium abscessus chromosome Chromosome, complete sequenceProbable fatty-acid-CoA racemase Far9e-2095.9
NC_010501:3671517:3688642368864236897001059Pseudomonas putida W619, complete genomeL-carnitine dehydratase/bile acid-inducible protein F8e-1785.9
NC_008699:833737:8555018555018566401140Nocardioides sp. JS614, complete genomeL-carnitine dehydratase/bile acid-inducible protein F9e-1579.3
NC_014220:1269870:1274476127447612756631188Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeL-carnitine dehydratase/bile acid-inducible protein F3e-1373.9
NC_011770:4542183:4557825455782545590061182Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-1063.9
NC_008463:4342119:4357867435786743590481182Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-1063.9
NC_011145:1732499:1732499173249917336741176Anaeromyxobacter sp. K, complete genomeL-carnitine dehydratase/bile acid-inducible protein F5e-0960.1
NC_003364:1463317:147146214714621472367906Pyrobaculum aerophilum str. IM2, complete genomefatty acid co-A racemase, conjectural6e-0856.6
NC_016906:2871272:2884868288486828871292262Gordonia polyisoprenivorans VH2 chromosome, complete genomeacyl-CoA transferase9e-0649.3