Pre_GI: BLASTP Hits

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Query: NC_012583:861225:880101 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 880101, End: 880862, Length: 762

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012580:796387:815262815262816023762Vibrio cholerae M66-2 chromosome II, complete sequencetranscriptional regulator, LuxR family9e-147519
NC_009456:383819:383080383080383841762Vibrio cholerae O395 chromosome 1, complete sequenceLuxR family transcriptional regulator9e-147519
NC_002506:822401:841276841276842037762Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetranscriptional regulator, LuxR family9e-147519
NC_012667:504534:503795503795504547753Vibrio cholerae MJ-1236 chromosome 2, complete genometranscriptional regulator LuxR family6e-145513
NC_016945:822229:841143841143841862720Vibrio cholerae IEC224 chromosome II, complete sequenceLuxR family transcriptional regulator2e-138491
NC_016446:522936:541850541850542569720Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completetranscriptional regulator, LuxR family2e-138491
NC_013446:2961647:296590429659042966623720Comamonas testosteroni CNB-2, complete genometranscriptional regulator, luxR family7e-69260
NC_008027:2996947:301528030152803015987708Pseudomonas entomophila L48, complete genometranscriptional regulator, luxR family2e-67255
NC_016027:2580477:258117025811702581910741Gluconacetobacter xylinus NBRC 3288, complete genomeLuxR family transcriptional regulator3e-62238
NC_010943:1884695:188720418872041887908705Stenotrophomonas maltophilia K279a, complete genomeputative LuxR family transcriptional regulatory protein7e-56217
NC_010514:6000:278042780428550747Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completetranscriptional regulator, LuxR family8e-1374.3
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein3e-1065.9
NC_014923:2672000:267549126754912676213723Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-0963.9
NC_015675:2839000:284249128424912843213723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-0963.9
NC_019973:2744000:274754427475442748266723Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-0963.9
NC_007761:3047321:304927530492753050057783Rhizobium etli CFN 42, complete genomeautoinducer transcriptional regulator protein2e-0963.2
NC_007778:3784104:379951837995183800240723Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LuxR family4e-0962
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein7e-0961.2
NC_017249:8221992:822574082257408226213474Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator4e-0858.5
NC_010172:5036385:503965450396545040385732Methylobacterium extorquens PA1, complete genomeAutoinducer-binding domain protein9e-0857.4
NC_012988:5516872:552180955218095522306498Methylobacterium extorquens DM4, complete genomeN-acylhomoserine lactone LuxR family transcriptional regulator3e-0755.8
NC_020453:6821500:683645968364596837193735Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LuxR family3e-0755.5
NC_015259:734795:739811739811740503693Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein2e-0653.1
NC_003888:7866148:787537478753747876051678Streptomyces coelicolor A3(2), complete genometwo-component system response regulator2e-0652.8
NC_015589:3241364:325205832520583252759702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver2e-0652.8
NC_015259:485015:532878532878533531654Polymorphum gilvum SL003B-26A1 chromosome, complete genomeLuxR family transcriptional regulator2e-0652.8
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator2e-0652.8
NC_014834:614890:624618624618625346729Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein4e-0652
NC_014834:2206119:223396822339682234687720Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein4e-0652