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Query: NC_012583:861225:870719 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 870719, End: 870880, Length: 162

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:522936:532427532427532588162Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeintegrase-related protein3e-24110
NC_012667:504534:513776513776513937162Vibrio cholerae MJ-1236 chromosome 2, complete genomephage integrase3e-24110
NC_012580:796387:805881805881806042162Vibrio cholerae M66-2 chromosome II, complete sequenceintegrase-like protein3e-24110
NC_009456:383819:393062393062393223162Vibrio cholerae O395 chromosome 1, complete sequenceintegrase-related protein3e-24110
NC_002506:822401:831895831895832056162Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeintegrase-related protein3e-24110
NC_016945:822229:831744831744831881138Vibrio cholerae IEC224 chromosome II, complete sequenceintegrase-like protein3e-1993.6