Pre_GI: BLASTP Hits

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Query: NC_012583:861225:866338 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 866338, End: 866541, Length: 204

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:822229:827339827339827542204Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-24110
NC_016446:522936:528046528046528249204Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-24110
NC_012667:504534:518115518115518318204Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein3e-24110
NC_012580:796387:801500801500801703204Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein3e-24110
NC_009456:383819:397401397401397604204Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-24110
NC_002506:822401:827514827514827717204Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-24110
NC_004603:1961432:197030119703011970504204Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein5e-1373.2
NC_008700:3514745:352651235265123526721210Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein2e-0857.8