Pre_GI: BLASTP Hits

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Query: NC_012583:683887:684201 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 684201, End: 685898, Length: 1698

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:839318:8410448410448427411698Vibrio cholerae MJ-1236 chromosome 2, complete genomeSgrR sugar-phosphate stress transcriptional activator of SgrS small RNA01168
NC_012912:647369:6666046666046682711668Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 52e-92340
NC_009648:3224495:3251320325132032529991680Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component1e-46187
NC_011083:2847318:2872149287214928738281680Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component3e-45183
NC_011751:3048490:3071573307157330732671695Escherichia coli UMN026 chromosome, complete genomeputative dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic component from bacteriophage origin3e-45183
NC_003197:2894344:2897643289764328993221680Salmonella typhimurium LT2, complete genomeputative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component3e-45183
NC_016810:2871689:2920209292020929218881680Salmonella enterica subsp. enterica serovar Typhimurium strputative solute-binding protein3e-45183
NC_016856:2896630:2917868291786829195471680Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component3e-45183
NC_016857:2871689:2920209292020929218881680Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component3e-45183
NC_016860:2917910:2921209292120929228881680Salmonella enterica subsp. enterica serovar Typhimurium strputative dipeptide/oligopeptide/nickel ABC transporter substrate binding protein3e-45183
NC_016863:2844883:2866121286612128678001680Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component3e-45183
NC_017046:2896651:2918950291895029206291680Salmonella enterica subsp. enterica serovar Typhimurium str. 798solute-binding protein3e-45183
NC_016047:1234743:1247897124789712496241728Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeoligopeptide ABC transporter substrate-binding protein4e-32139
NC_016641:1369424:1387603138760313893421740Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter periplasmic protein1e-29131
NC_012673:2064298:2066062206606220676871626Exiguobacterium sp. AT1b, complete genomeextracellular solute-binding protein family 53e-1997.4
NC_011744:688000:7029527029527046131662Vibrio splendidus LGP32 chromosome 2, complete genomeABC type uncharacterized transport system5e-1996.3
NC_010424:422029:4220294220294235971569Candidatus Desulforudis audaxviator MP104C, complete genomeextracellular solute-binding protein, family 53e-1583.6
NC_010718:2551000:2570043257004325716411599Natranaerobius thermophilus JW/NM-WN-LF, complete genomeextracellular solute-binding protein family 52e-1274.3
NC_009937:3324793:3325461332546133270531593Azorhizobium caulinodans ORS 571, complete genomeABC-type dipeptide transport periplasmic component1e-1172
NC_018870:2537350:2549171254917125507601590Thermacetogenium phaeum DSM 12270 chromosome, complete genomeoligopeptide-binding protein AppA1e-1171.6
NC_007948:4558000:4572241457224145738211581Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 52e-1170.9
NC_008618:1804610:1823892182389218254391548Bifidobacterium adolescentis ATCC 15703, complete genomeprobable solute binding protein of ABC transporter system2e-1170.9
NC_007948:4558000:4581047458104745826271581Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 54e-1170.1
NC_012912:2553391:2553391255339125548991509Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 51e-1068.6
NC_007948:4620661:4636214463621446377791566Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 52e-1068.2
NC_018870:354164:3613953613953629481554Thermacetogenium phaeum DSM 12270 chromosome, complete genomeoligopeptide-binding protein AppA2e-1067.8
NC_013956:4627890:4627890462789046294341545Pantoea ananatis LMG 20103 chromosome, complete genomeNikA3e-1067.4
NC_013172:3093467:3113540311354031151261587Brachybacterium faecium DSM 4810, complete genomeABC-type dipeptide transport system, periplasmic component7e-1065.9
NC_014640:4031336:4032415403241540339861572Achromobacter xylosoxidans A8 chromosome, complete genomeextracellular solute-binding protein, family 5 middle family protein 208e-1065.9
NC_014328:2467239:2476970247697024785261557Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative peptide ABC transporter periplasmic protein1e-0965.5
NC_003552:3058523:3073304307330430749651662Methanosarcina acetivorans C2A, complete genomepeptide ABC transporter, solute-binding protein1e-0965.1
NC_014550:3534000:3553854355385435553711518Arthrobacter arilaitensis Re117, complete genomeABC transporter substrate-binding protein1e-0965.1
NC_014002:31293:4612646126477121587Methanohalophilus mahii DSM 5219 chromosome, complete genomeextracellular solute-binding protein family 51e-0965.1
NC_003911:1749467:1751479175147917531371659Silicibacter pomeroyi DSS-3, complete genomeoligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein2e-0964.7
NC_018870:2537350:2541625254162525431931569Thermacetogenium phaeum DSM 12270 chromosome, complete genomeheme-binding protein A2e-0964.7
NC_016906:1565868:1586442158644215880491608Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative peptide-binding periplasmic protein2e-0964.3
NC_014831:2133060:2152264215226421538621599Thermaerobacter marianensis DSM 12885 chromosome, complete genomeextracellular solute-binding protein family 53e-0963.9
NC_012881:3520956:3534493353449335360641572Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 53e-0963.9
NC_017281:1533454:1557682155768215592171536Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomePutative peptide ABC-transport system periplasmic peptide-binding protein4e-0963.5
NC_003912:1629937:1654165165416516557001536Campylobacter jejuni RM1221, complete genomepeptide ABC transporter, periplasmic peptide-binding protein4e-0963.5
NC_009832:1664238:1690775169077516923131539Serratia proteamaculans 568, complete genomeextracellular solute-binding protein family 56e-0962.8
NC_015566:2957956:2974321297432129758291509Serratia sp. AS12 chromosome, complete genomeABC transporter periplasmic protein1e-0862.4
NC_014507:906960:9077559077559093321578Methanoplanus petrolearius DSM 11571 chromosome, complete genomeextracellular solute-binding protein family 51e-0862
NC_015573:110108:1352311352311367721542Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein2e-0861.6
NC_020211:1655826:1676197167619716777321536Serratia marcescens WW4, complete genomeglutathione periplasmic binding protein, ABC superfamily transporter2e-0861.2
NC_009328:2083386:2114619211461921162081590Geobacillus thermodenitrificans NG80-2 chromosome, complete genomepeptide ABC transporter substrate-binding protein2e-0861.2
NC_009707:1685381:1709208170920817107431536Campylobacter jejuni subsp. doylei 269.97 chromosome, completepeptide ABC transporter periplasmic peptide-binding protein2e-0860.8
NC_015573:1979202:1990426199042619919881563Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein2e-0860.8
NC_015573:110108:1130731130731146381566Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein2e-0860.8
NC_014034:152264:1730361730361745381503Rhodobacter capsulatus SB1003 chromosome, complete genomepeptide ABC transporter periplasmic peptide-binding protein6e-0859.7
NC_008787:1463696:1487846148784614893811536Campylobacter jejuni subsp. jejuni 81-176, complete genomepeptide ABC transporter, periplasmic peptide-binding protein1e-0758.5
NC_014838:175939:2008292008292023641536Pantoea sp. At-9b plasmid pPAT9B01, complete sequencefamily 5 extracellular solute-binding protein1e-0758.5
NC_012917:1740542:1740542174054217420861545Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeextracellular solute-binding protein family 51e-0758.5
NC_002163:1471517:1512999151299915145341536Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative peptide ABC-transport system periplasmic peptide-binding protein1e-0758.5
NC_013171:416279:4382424382424397531512Anaerococcus prevotii DSM 20548, complete genomeextracellular solute-binding protein family 52e-0758.2
NC_011661:1143787:1153051115305111546131563Dictyoglomus turgidum DSM 6724, complete genome4-phytase2e-0757.8
NC_007952:3283394:3295692329569232972271536Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC nickel transporter, periplasmic ligand binding protein2e-0757.8
NC_013721:1204566:1204566120456612062571692Gardnerella vaginalis 409-05, complete genomebacterial extracellular solute-binding protein, family 53e-0757.4
NC_005773:5684000:5699457569945757010941638Pseudomonas syringae pv. phaseolicola 1448A, complete genomepeptide ABC transporter, periplasmic peptide-binding protein4e-0757
NC_012032:1602812:1602812160281216046351824Chloroflexus sp. Y-400-fl, complete genomeextracellular solute-binding protein family 56e-0756.6
NC_014011:813645:8253258253258268421518Aminobacterium colombiense DSM 12261 chromosome, complete genomeextracellular solute-binding protein family 56e-0756.6
NC_004193:375416:4901834901834917721590Oceanobacillus iheyensis HTE831, complete genomeoligopeptide ABC transporter oligopeptide-binding protein6e-0756.2
NC_010725:4035397:4058816405881640603811566Methylobacterium populi BJ001, complete genomeextracellular solute-binding protein family 58e-0755.8
NC_014732:141000:1529661529661543811416Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completeABC-type dipeptide transport system, periplasmic component9e-0755.8
NC_021150:5234000:5256649525664952581811533Azotobacter vinelandii CA6, complete genomeextracellular solute-binding protein3e-0653.9
NC_012560:5276000:5298757529875753002891533Azotobacter vinelandii DJ, complete genomeBacterial extracellular solute-binding protein, family 53e-0653.9
NC_014761:516981:5169815169815185611581Oceanithermus profundus DSM 14977 chromosome, complete genomeextracellular solute-binding protein family 53e-0653.9
NC_009376:1335074:1351403135140313529831581Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeextracellular solute-binding protein4e-0653.5
NC_002570:367000:3713633713633729131551Bacillus halodurans C-125, complete genomeoligopeptide ABC transporter (oligopeptide-binding protein)4e-0653.5
NC_016745:1257397:1257397125739712589531557Oceanimonas sp. GK1 chromosome, complete genomedipeptide-binding protein6e-0653.1